Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidiopsis_20lactophilus_20[genbank_20GCA_5F001599975.1_202016 -03-01] 19 sequences; 22,180,604 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1 111 2e-19 >seq1 Length=5326569 Score = 111 bits (122), Expect = 2e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 133003 CCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCT 133062 || || ||||||| |||||||||||| ||||| || || ||||||||||| || ||||| Sbjct 654012 CCGGAGAAGAAGATGCCCTCGACGGCGGCGAAGGCGACGAGGCGCTCGCCAAAAGTGGCG 654071 Query 133063 TCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTT 133122 || ||| | |||||||| || ||||| |||||||| | |||| |||||| || || Sbjct 654072 TCCTTGTCGCCGATCCAGTTGAGGGCCCAGTCGGCCTTCTTCTTGATGCACGGGATGGTC 654131 Query 133123 TCGATGGCGTTCAA 133136 ||||| | ||| || Sbjct 654132 TCGATCGAGTTGAA 654145 Score = 100 bits (110), Expect = 3e-16 Identities = 85/105 (81%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 132894 GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAA 132953 ||| ||||||||| |||| ||||||||| | ||| ||||| |||||| ||| || | Sbjct 653846 GCAGGCAAAGTCGGTGTGCAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAG 653905 Query 132954 GCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAA 132998 |||||||||||||||||| || |||||||| || |||| ||||| Sbjct 653906 GCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAAGCGAA 653950 Score = 91.5 bits (100), Expect = 1e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 133222 TGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACC 133281 |||||||| || ||||| || ||||| | | || ||||| | | ||| ||||||| | Sbjct 654283 TGAAAGCCATAGAAGCAGCGGGCCTCAGCGGCTTGGACTTCGTTGGAGAAGCGCTCGAGC 654342 Query 133282 AGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTG 133331 || || |||||||||||||| ||| |||||||||||||||| ||||| Sbjct 654343 AGGTTCTCGTTGACGATGCCATCGGACGCGGCGAAAAAGGCCAAGACGTG 654392 Score = 87.8 bits (96), Expect = 2e-12 Identities = 72/87 (83%), Gaps = 3/87 (3%) Strand=Plus/Plus Query 133344 GCGCTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTC 133400 ||||||||||||||| | | |||||||||| || ||||||||||||||||| ||| Sbjct 654467 GCGCTCGTTGTCGTTGAGCCTGTTCTCCCAGTCGTGCAAGTCCTTGGACAGGTCCATCTC 654526 Query 133401 CTCGACGGTCCAAAACGACGCCTCGGC 133427 |||| ||||||| ||||| || ||||| Sbjct 654527 CTCGGCGGTCCAGAACGAGGCTTCGGC 654553 Score = 86.0 bits (94), Expect = 6e-12 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| |||||| ||||||||||||| ||||| | || |||||||| || || Sbjct 2644440 GACAAGGAGGGCATTCCCCCCGACCAACAGCGCCTCATCTTTGCTGGCAAACAACTCGAG 2644499 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGG 38433 |||| | ||||| ||||||||||| ||||||| Sbjct 2644500 GACGGCAGGACCCTGTCTGACTACAACATTCAAAAGG 2644536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172681208960