Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidiopsis_20lactophilus_20[genbank_20GCA_5F001599975.1_202016 -03-01] 19 sequences; 22,180,604 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq3 179 5e-40 seq1 95.1 2e-14 >seq3 Length=3806995 Score = 179 bits (198), Expect = 5e-40 Identities = 264/374 (71%), Gaps = 0/374 (0%) Strand=Plus/Minus Query 7019 AAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTA 7078 ||||||||||| ||||| | || ||||| ||||| ||||| |||||||| |||| || Sbjct 401091 AAGATGGCGGCCTGGACGGCGGCGCCGTAAGCGACGGCCTCGTCGGGGTTGATCGACTTG 401032 Query 7079 TTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTC 7138 || | || || ||||| || | || || | | | || || | ||||| || ||| Sbjct 401031 TTGGGCTCCTTGCCGTTGAAGAAGTCGGAGACGAGCTTCTGGATCCTGGGGATACGGGTC 400972 Query 7139 GATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGT 7198 || || ||||| | ||||| || | ||| || || || |||||||| ||||| || || Sbjct 400971 GAGCCGCCGACGAGCACGATCTCGTGCACGTTGGACTTGTCGATCTTGGAGTCGCGGAGC 400912 Query 7199 GTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGT 7258 || ||||| || ||||| ||||| | |||| ||||| ||||| || || Sbjct 400911 ACCTTCTCGACGGGGTCCATGGTGGAGCGGAAGAGGTCCTGGCACAGCTCCTCGAAGCGG 400852 Query 7259 GCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTT 7318 |||||||| | ||| || ||||| || || || ||| | | || || || || |||| Sbjct 400851 GCACGGGTGAGGGAGGTGTAGAAGTCGACACCCTCGAAGAGTGAGTCGATCTCGATGGAG 400792 Query 7319 GTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGA 7378 || || || | ||||| | || |||||||||||||| || || || || | |||||| Sbjct 400791 GTCTGAGCAGCGGAAGAGAGGGTGCGCTTTGCGCGCTCGCAGGCGGTGCGGAGACGACGG 400732 Query 7379 AGGGCACGCGGGTT 7392 ||||| || | ||| Sbjct 400731 AGGGCGCGGGCGTT 400718 Score = 149 bits (164), Expect = 8e-31 Identities = 238/342 (70%), Gaps = 0/342 (0%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||| || |||||||||||||| || || || ||||| || |||||||| ||||| || Sbjct 400595 ATCGAAGTCCTCACCACCCAAGTGGGTGTCACCGGCGGTGGCCTTGACTTCGAAGATGCC 400536 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | || ||| | || | || ||||| || || || || || || || || ||||| || Sbjct 400535 CTCCTCGATGGTCAAGAGGGAGACATCGAAAGTGCCGCCTCCGAGATCGAAGATGAGCAC 400476 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 |||| | ||| || ||||| || | ||||| ||||| || || || || || || Sbjct 400475 GTTCTTCTCGCCGGTCGACTTCTTGTCCAAGCCGTAGGCGATGGCAGCGGCGGTGGGCTC 400416 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || || || || ||| ||||| || || | | | || || || || || || Sbjct 400415 GTTGATGATGCGGAGGACGTTGAGGCCGGCGATCATGCCAGAGTCCTTGGTGGCCTGGCG 400356 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || || ||||| |||||||| || || || ||||| ||||| |||| | ||||| Sbjct 400355 CTGAGAGTCGTTGAAGTAGGCGGGAACGGTGACGACGGCGTCGGTGATGGAAGTGCCGAG 400296 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGA 7797 || | ||| ||| | || ||| ||| ||| ||||| || Sbjct 400295 GTAGGCTTCGGCGGTCTCGCGCATCTTGAGAAGGACCATGGA 400254 >seq1 Length=5326569 Score = 95.1 bits (104), Expect = 2e-14 Identities = 183/267 (69%), Gaps = 5/267 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||||||||| || || || ||||| || ||| || || | || Sbjct 4849448 TCAAAGTCCTCACCACCCAAGTGAGTGTCACCGGCGGTGGCCAGGACCTCGAAAACGCCA 4849389 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || ||| | | | || ||||| || || || || |||| ||| | | || | Sbjct 4849388 TCATCGATGCTGAGGAGGGAGACATCGAAAGTGCCTCCTCCCAAGTCGTAGACGATGATC 4849329 Query 7577 T-TCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | ||| ||| || | || ||| || || ||||||||||| || || ||||| ||||| Sbjct 4849328 TGTCGC-TCGCCGCCCTT---CTTGTCCAGGCCGTACGCGATGGCGGCGGCCGTGGGTTC 4849273 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || | ||| || || ||| ||||| || || | ||||| || || ||||| || Sbjct 4849272 GTTGACAATTCGGAGGACGTTGAGGCCGGCGATGACACCGGCATCCTTGGTGGCTTGACG 4849213 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGAC 7722 || | ||||| ||||| |||||||| Sbjct 4849212 CTGGGCGTCGTTGAAGTATGCCGGGAC 4849186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132649155960