Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidiopsis_20lactophilus_20[genbank_20GCA_5F001599975.1_202016 -03-01] 19 sequences; 22,180,604 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq5 114 2e-20 seq1 107 4e-18 >seq5 Length=3070904 Score = 114 bits (126), Expect = 2e-20 Identities = 147/202 (73%), Gaps = 3/202 (1%) Strand=Plus/Plus Query 25921 GGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT 25980 ||||| || ||| | || |||||||||||| || || ||||| || ||| ||| Sbjct 1666787 GGTTCATTCGCGTCAATATTCTGGCTCAAGAAGCGCGGTTTAATGCCGGGCCTGACCTTC 1666846 Query 25981 TCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTAC 26040 ||||||||||||||| | | ||||| || || |||| || |||||||||||||||| | Sbjct 1666847 TCCAACGAGCTCATCTCCCGCGACGAAGGCCTGCACACCGACTTTGCCTGCCTGCTCTTC 1666906 Query 26041 ACGGGCCACTTGCTCCACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCT 26100 | |||| || ||||| || || ||||| | ||||| |||||| ||| Sbjct 1666907 TC---CCACCTGGAGCACAAGCCCTCGCAAGACCGCATCTACTCCATCATCTCCTCCGCT 1666963 Query 26101 GTGGAGATCGAGAAGGAGTTTC 26122 || |||||||||||||| |||| Sbjct 1666964 GTCGAGATCGAGAAGGACTTTC 1666985 >seq1 Length=5326569 Score = 107 bits (118), Expect = 4e-18 Identities = 144/200 (72%), Gaps = 3/200 (2%) Strand=Plus/Minus Query 25921 GGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT 25980 || || || || ||||||||||||||||| || || ||||||||| || ||| Sbjct 653956 GGCTCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCACCTTC 653897 Query 25981 TCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTAC 26040 ||||||||||||||| | | |||||||| || |||| || ||||||||||| |||| | Sbjct 653896 TCCAACGAGCTCATCTCCCGCGACGAGGGCCTGCACACCGACTTTGCCTGCCTCCTCTTC 653837 Query 26041 ACGGGCCACTTGCTCCACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCT 26100 | |||| | | | ||| | ||| |||||| | |||||| | ||||| Sbjct 653836 TC---CCACCTCAAGCGCCGACCCCACCCAGACACCGTCAAGGCCATCATCGAGGAGGCC 653780 Query 26101 GTGGAGATCGAGAAGGAGTT 26120 || ||||| ||||||||||| Sbjct 653779 GTCGAGATTGAGAAGGAGTT 653760 Score = 87.8 bits (96), Expect = 3e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 25798 ATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGC 25857 |||||| ||| || ||||||||| |||||| |||||| | || |||||| | | Sbjct 654136 ATCGAGACCATCCCGTGCATCAAGAAGAAGGCCGACTGGGCCCTCAACTGGATCGGCGAC 654077 Query 25858 CAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTC 25917 || ||| || ||||||||||| || || ||||| || || || ||||||||||| ||| Sbjct 654076 AAGGACGCCACTTTTGGCGAGCGCCTCGTCGCCTTCGCCGCCGTCGAGGGCATCTTCTTC 654017 Query 25918 AGCGGTTCGTT 25928 ||||| ||| Sbjct 654016 TCCGGTTTGTT 654006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844579399360