Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidiopsis_20lactophilus_20[genbank_20GCA_5F001599975.1_202016 -03-01] 19 sequences; 22,180,604 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 1e-15 >seq1 Length=5326569 Score = 98.7 bits (108), Expect = 1e-15 Identities = 87/109 (80%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 171943 GCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGT 172002 ||||||||||| || ||||| |||||||| ||||| || || || || || |||||||| Sbjct 2644428 GCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAACAGCGCCTCATCTTTGCTGGC 2644487 Query 172003 AAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGG 172051 ||||| || || || || | ||||| |||| |||||| ||||||||| Sbjct 2644488 AAACAACTCGAGGACGGCAGGACCCTGTCTGACTACAACATTCAAAAGG 2644536 Score = 93.3 bits (102), Expect = 6e-14 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| || ||| | || || || || |||||| | || || ||| || Sbjct 2644637 ATGCAAATCTTTGTCAAGACCTTGACCGGCAAGACCATCACCTTGGAAGTCGAGAGCTCC 2644696 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| | |||| || ||||| || || ||||| ||||| || ||||| ||| Sbjct 2644697 GACTCGATCGACGCCGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAG 2644756 Query 171982 CAACGACTTATTTTTGCTGGTAA 172004 || || || || || ||||| || Sbjct 2644757 CAGCGCCTGATCTTYGCTGGAAA 2644779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657862243757680