Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidiopsis_20lactophilus_20[genbank_20GCA_5F001599975.1_202016 -03-01] 19 sequences; 22,180,604 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 1e-14 >seq2 Length=4543988 Score = 96.9 bits (106), Expect = 1e-14 Identities = 213/315 (68%), Gaps = 12/315 (4%) Strand=Plus/Plus Query 302568 AATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTAC 302627 || ||| |||| | ||||| ||||| ||||| || |||||||| | || || || Sbjct 3531034 AACGTCCTCCAAAGCCTTGACCAAACGGCGCTGGATGTAACCAGTCTCGGCGGTCTTGAC 3531093 Query 302628 AGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCG 302687 || || || || | || | || || |||| || |||||||| | ||||| ||| Sbjct 3531094 GGCCGTGTCGATCAACCCTTCTCGTCCGGCCATGGCGTGGAAGAAAAACTCTTGCGGAGT 3531153 Query 302688 TAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTT 302747 || || | | | | ||| |||| ||||| || |||| ||| ||||| | |||| ||| Sbjct 3531154 GAGACCTCGGAGATACGAGTTCTCGACGAAGCCGCGCGACTCTGGCGAGTAGTCGTCCTT 3531213 Query 302748 GGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTT 302807 | || || ||||| || | | || | ||| | ||||| ||||| || |||||| Sbjct 3531214 CGCGAAATGCGGCAGAGTTCGATACTTGAAACCGAAGGGGATGCGCTTGCCCTCAACGGA 3531273 Query 302808 CTGCTGTCCCA----GGCACGAAATCATCTGCGAAATATTTAAATCACTG--CCCTTGGA 302861 ||||| || | ||| ||| |||||| || || || | | | | |||||||| Sbjct 3531274 TTGCTGACCGACGACGGC-CGA---CATCTGGGAGATGTTGA--TGAAGGATCCCTTGGA 3531327 Query 302862 GCCAGCATTTACCAT 302876 ||||||| | ||||| Sbjct 3531328 GCCAGCAATGACCAT 3531342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817241704403