Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidiopsis_20lactophilus_20[genbank_20GCA_5F001599975.1_202016 -03-01] 19 sequences; 22,180,604 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1 100 2e-16 seq2 96.9 2e-15 >seq1 Length=5326569 Score = 100 bits (110), Expect = 2e-16 Identities = 127/175 (73%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| ||||| || ||| | | |||| |||| ||||| || || |||| Sbjct 2645576 CCTTCTGGATGTTGTAGTCGGACAGGGTCCTGCCATCCTCCAACTGCTTGCCAGCAAAGA 2645517 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 |||| ||||||||||| | || | ||||||||||| | || || ||||||| Sbjct 2645516 TCAGGCGTTGCTGGTCAGGTGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGGCGT 2645457 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTT 34962 | ||||| || | |||||| || | ||| |||||||| || || | |||||| Sbjct 2645456 CGATCGAGTCGGAGCTCTCGACCTCCAAGGTGATGGTCTTGCCGGTCAAGGTCTT 2645402 Score = 96.9 bits (106), Expect = 2e-15 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 34834 CTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTT 34893 |||||| || |||||||| || |||||||| |||| | ||||||||||| | || || Sbjct 2644780 CTTTCCAGCRAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTT 2644721 Query 34894 TTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGT 34953 ||||||| | ||||| || | |||||| || | ||| |||||||| || || Sbjct 2644720 CGCCTTGACGGCGTCGATCGAGTCGGAGCTCTCGACTTCCAAGGTGATGGTCTTGCCGGT 2644661 Query 34954 GAGGGTCTTTACAAAGATCTGCATG 34978 | |||||| |||||||| |||||| Sbjct 2644660 CAAGGTCTTGACAAAGATTTGCATG 2644636 >seq2 Length=4543988 Score = 96.9 bits (106), Expect = 2e-15 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || ||||||||||| || |||||||| |||| | ||||||||||| Sbjct 1346992 TCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 1347051 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||||| | | ||||| || | | ||||| || | ||| |||||| Sbjct 1347052 TGGATCTTGGCCTTGACAGCGTCGATCGAGTCGCTCGATTCGACTTCCAAGGTGATGGTC 1347111 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || | |||||| || |||||||||||| Sbjct 1347112 TTCCCAGTCAAGGTCTTGACGAAGATCTGCATG 1347144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692724581761