Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidiopsis_20lactophilus_20[genbank_20GCA_5F001599975.1_202016 -03-01] 19 sequences; 22,180,604 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq5 150 2e-31 >seq5 Length=3070904 Score = 150 bits (166), Expect = 2e-31 Identities = 210/292 (72%), Gaps = 2/292 (1%) Strand=Plus/Minus Query 147210 AATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCA 147269 ||||| ||||| ||| ||||||||| |||||||| || |||| | | | Sbjct 777338 AATCTTGTCGATGACCTCTTGCAGCTGGTCGACGCCCTGACCTTGATAGTCCGCGTCAAA 777279 Query 147270 GTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCC 147329 | || |||| |||||||||||||| ||| || ||||| || || || ||||| || || Sbjct 777278 GCCCTTGTACTCGGCCCCAAAGTGCCGCCATTGAAAGCCATAGACCGGGCCCAGCTCCCC 777219 Query 147330 G-GGCTTTCTGTGCGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCC 147388 ||| | |||||| | ||| || | || ||||| | || |||| | |||||| Sbjct 777218 CTGGCGGTA-GTGCGACAGGCCGACCTTGTCCAGGTACTCGCGCGAGCCGTTGCCGTCCC 777160 Query 147389 AGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGA 147448 |||||||||| || || || |||||| |||| || ||||||||| ||||||||| | Sbjct 777159 AGATGCCCACGCCTTTAGCCTTGAGCTCGTTAGCATCGGTGGAGCCCTTGATGAACCACA 777100 Query 147449 GCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGG 147500 |||||||||| | || || | |||||| ||||| || || |||| ||| || Sbjct 777099 GCAGCTCCTCGACCACGCCGCGCCAAAACACCCTTTTCGTCGTCAACAGAGG 777048 Score = 96.9 bits (106), Expect = 4e-15 Identities = 240/368 (65%), Gaps = 21/368 (6%) Strand=Plus/Minus Query 146800 GGGTGCGGGTGGTAGCCCTCGAGGGCAAAATCTTCTGCCCTGAAATCGTCTATGTCCTCC 146859 |||||||| | ||||||| | | |||| || || | | ||| ||||| | |||| | Sbjct 777829 GGGTGCGGCTTGTAGCCCACCACCTCAAAGTCCTCGGACGTGACCTCGTCCACCTCCTTC 777770 Query 146860 ACCCGCCTCAAAATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTC 146919 || || | |||||||||||| ||||| | | | ||||| | | Sbjct 777769 CTTGGCGTCTTCCACACCAGCTTGGGGAAGTCCCGGGGCTCGCGCGTGAGCTGGACGCCC 777710 Query 146920 AGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCC 146979 | |||||| ||||||| ||||||||| ||||| || || | | | | ||| | Sbjct 777709 AAGGGCTCGACGTGGTCCTTGTAGACGTGGGCGTCGCCGAGCTGGAGGATGAGCTCCTTC 777650 Query 146980 GGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTG 147039 |||| | |||| | || || | |||| |||||||| | |||| ||| |||||| Sbjct 777649 GGCTCGGTGTCGGTGATTTGAGCGAGGATGTGGGTGAGCAAGGCGTAGGAGGCGATGTTG 777590 Query 147040 AAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGC------ 147093 ||||| || || ||||||| ||| |||| | |||||||| ||| |||||| Sbjct 777589 AAGGGCACGCCGAGGCCCAGGTCGGCCGAGCGCTGGTACATGAAGCAGGAGAGCGACGGC 777530 Query 147094 ----TCCCCGTCGGC-----------CACGTAAAACTGGCACAGGATGTGGCACGGCGGC 147138 || || |||| |||||| |||||||| | ||||||||||||||| Sbjct 777529 TTGGTCGACGGCGGCGTGGGCAGCGTCACGTAGAACTGGCAGAACATGTGGCACGGCGGC 777470 Query 147139 AGCGCCAT 147146 | ||||| Sbjct 777469 AAAGCCAT 777462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487861421600