Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidiopsis_20lactophilus_20[genbank_20GCA_5F001599975.1_202016 -03-01] 19 sequences; 22,180,604 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1 154 2e-32 seq5 86.0 7e-12 >seq1 Length=5326569 Score = 154 bits (170), Expect = 2e-32 Identities = 305/450 (68%), Gaps = 6/450 (1%) Strand=Plus/Plus Query 20014 GGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCGACCGAGGCGGC 20073 || |||||| || || |||| ||| | |||||| |||| ||||| | | ||| Sbjct 1974791 GGCCGTCACCCGCAACTTGAACCGCATTATCGATGTCAACTACTACCCTGTTCAAGAGGC 1974850 Query 20074 GCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGACGT 20133 || ||||| ||||| ||||| || |||| | || || || || || ||||||| Sbjct 1974851 CAAGAACTCGAACATGCGGCACCGACCCATCGGCGTTGGTGTTCAAGGTCTCGCCGACGC 1974910 Query 20134 TTTCATGATGCTCGGCCTCTCATTCGACGATCCCAAGGCGCGCGAGCTCAACAAGGGCAT 20193 |||||| ||| || | | || ||| |||| || || || |||||| || Sbjct 1974911 GTTCATGGCGCTGCGCATGCCTTTTGACTCTCCCGCCGCCCGTCTCCTGAACAAGCAGAT 1974970 Query 20194 CTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGAACTCGCCAAAGAGGACGG 20253 | |||| || | |||||||| || ||| || || ||| ||||||| || || || Sbjct 1974971 CCACGAGACCATCTACCACGCCGCTCTCGAGGTGTCCAACGAGCTCGCCATCGAAGAGGG 1975030 Query 20254 CCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCTCCAGCCGGACATGTG 20313 ||| ||| || ||| |||| || |||||| ||| || ||| |||||||| Sbjct 1975031 CCCTTACTCAACCTTCCAGGGCAGCCCAGCGTCCAGGGGCGAGCTTCAGTTCGACATGTG 1975090 Query 20314 GGGCGTCACTGAGAATGAGTTTTGG-AGCGC-----CCTCAAGGTTGAGATCAAGACCCA 20367 ||||||||| | ||||| || | |||||||| |||||| || Sbjct 1975091 GGGCGTCACCCCTACCACCCTTTGGGAGTGGGATAGCCTCAAGGAGAAGATCATCGCCGG 1975150 Query 20368 CGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCGACCGCCCAGATCAT 20427 ||| || |||||| ||| | || ||||||||||||||||| |||||| |||||||| | Sbjct 1975151 CGGCCTGCGCAACAGCTTGTTGGTTGCGCCCATGCCGACCGCGTCGACCTCCCAGATCTT 1975210 Query 20428 GGGGAACAACGAGGCTTTCGAGCCGTACAC 20457 ||| ||||||||| |||||||| ||||| Sbjct 1975211 GGGCAACAACGAGTGCTTCGAGCCTTACAC 1975240 Score = 123 bits (136), Expect = 3e-23 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 79488 CCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTA 79547 ||| ||||| || ||||||||||| | ||| ||||||| ||| || |||| ||||| Sbjct 1974122 CCATGGCTCGAGGTAGATGGCGAAAGCACCGGGGCGCTTGTTGCCACCTTGGTCAACGTA 1974063 Query 79548 CCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGT 79607 ||||||||||||||||| || |||||||||||||||| ||||| | | |||||| || Sbjct 1974062 GCGGGCCGTGTTGTTGAACACGCGGAGCATGGGCACGACGCCGTTCGAGTAGCCGTTGGT 1974003 Query 79608 CCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCCGGA 79667 ||| ||| | || | || || ||||| | ||||| || ||||| || | Sbjct 1974002 GCCGCCGATGTAGGAGCCAGTGGCGCGGATGTTGTGGATGTGGAGGCCAATGCCACCAGC 1973943 Query 79668 CCACTTGGAGATGTGCGCGCA 79688 | ||||||||| || ||||| Sbjct 1973942 CGTCTTGGAGATCTGGGCGCA 1973922 Score = 107 bits (118), Expect = 2e-18 Identities = 296/453 (65%), Gaps = 12/453 (3%) Strand=Plus/Minus Query 78547 GTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATG 78606 ||||| |||||||| ||||||||| |||| |||||||| |||||| |||||||||||| Sbjct 1975240 GTGTAAGGCTCGAAGCACTCGTTGTTGCCCAAGATCTGGGAGGTCGACGCGGTCGGCATG 1975181 Query 78607 GGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTTTAGG------ 78660 || || |||| | || || || || | |||||| |||| ||| Sbjct 1975180 GGCGCAACCAACAAGCTGTTGCGCAGGCCGCCGGCGATGATCTTCTCCTTGAGGCTATCC 1975121 Query 78661 CCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGAC 78720 | ||||||| | | | || ||||||||||| ||||| ||| |||| Sbjct 1975120 CACTCCCAAAGGGTGGTAGGGGTGACGCCCCACATGTCGAACTGAAGCTCGCCCCTGGAC 1975061 Query 78721 GCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCG 78780 || || |||| ||| || ||||| ||||| || ||||||| ||| ||| | Sbjct 1975060 GCTGGGCTGCCCTGGAAGGTTGAGTAAGGGCCCTCTTCGATGGCGAGCTCGTTGGACACC 1975001 Query 78781 AGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGGTC 78840 || || |||||||| | | |||| ||| |||||| || || || || Sbjct 1975000 TCGAGAGCGGCGTGGTAGATGGTCTCGTGGATCTGCTTGTTCAGGAGACGGGCGGCGGGA 1974941 Query 78841 TCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCG 78900 ||| || | | || ||| |||||| | ||||| || || || || || | || Sbjct 1974940 GAGTCAAAAGGCATGCGCAGCGCCATGAACGCGTCGGCGAGACCTTGAACACCAACGCCG 1974881 Query 78901 ATCGGTCGGTGGCGCATGTT---GCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGA 78957 || |||||||| |||||||| | |||| |||| | | ||||| |||| | Sbjct 1974880 ATGGGTCGGTGCCGCATGTTCGAGTTCTT---GGCCTCTTGAACAGGGTAGTAGTTGACA 1974824 Query 78958 TCGATGACGCGGTTCAGGTTACGCGTGACGACC 78990 ||||| | |||||||| ||| || |||||| || Sbjct 1974823 TCGATAATGCGGTTCAAGTTGCGGGTGACGGCC 1974791 Score = 100 bits (110), Expect = 3e-16 Identities = 79/95 (83%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 60024 GGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTC 60083 ||||| ||| | | || ||||||||||| ||||| ||||||||||| ||||| | ||| Sbjct 653956 GGCTCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCACCTTC 653897 Query 60084 TCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 ||||||||||| || ||||| ||||||||||| || Sbjct 653896 TCCAACGAGCTCATCTCCCGCGACGAGGGCCTGCA 653862 Score = 100 bits (110), Expect = 3e-16 Identities = 145/202 (72%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 19316 TGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCACTGCTCGAATATCCGGTCG 19375 ||||| || ||||||||| | | || || || || ||||| | || ||||| | Sbjct 1973922 TGCGCCCAGATCTCCAAGACGGCTGGTGGCATTGGCCTCCACATCCACAACATCCGCGCC 1973981 Query 19376 AGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGA-CGGTATCGTCCCAATGCTCCG 19434 | ||| | ||| || || ||||| || ||| ||| |||| || |||||||| Sbjct 1973982 ACTGGCTCCTACATCGGCGGCACCAACGGC-TACTCGAACGGCGTCGTGCCCATGCTCCG 1974040 Query 19435 CGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTT 19494 ||| ||||||||||||||| | ||||| |||| || ||| ||| ||| || | || Sbjct 1974041 CGTGTTCAACAACACGGCCCGCTACGTTGACCAAGGTGGCAACAAGCGCCCCGGTGCTTT 1974100 Query 19495 CGCCATCTACCTCGAGCCATGG 19516 |||||||||||||||||||||| Sbjct 1974101 CGCCATCTACCTCGAGCCATGG 1974122 Score = 98.7 bits (108), Expect = 1e-15 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 79702 TCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGT 79761 ||||||||||| ||||| ||||| |||||||| ||||||| |||||| ||||| ||| Sbjct 1973844 TCGTAGATGCCATCGATGGAGTCCTCCTTCATGGCGACCAAGAAGCAAGACGACAGCTGG 1973785 Query 79762 GGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTC 79821 || | | || ||||||||||| || || |||| ||||| |||||| | | |||| Sbjct 1973784 GGATGGGGAGTGCCGGCGTTGAACAGAGTGGGCGAGGCGTGGGTGAAGTAGCGCTCGCTC 1973725 Query 79822 ATCAGAT 79828 ||| ||| Sbjct 1973724 ATCTGAT 1973718 Score = 82.4 bits (90), Expect = 8e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 79057 GATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCAC 79116 || |||| |||||| ||||| |||||| || || ||||||||| || |||||| Sbjct 1974671 GAAGCCAAGTTGCAGACGGCAACCTCGTCGGGAGCCGAGTACTCGATGATCTCGGTGCAC 1974612 Query 79117 AAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTT 79154 || || || |||||||||||||| | |||||||||||| Sbjct 1974611 AAGTTGGAGGACTTGATGGTGCCCAAGTTCTTCTGGTT 1974574 Score = 82.4 bits (90), Expect = 8e-11 Identities = 128/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 20618 CTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCG 20677 ||||||| ||| |||| ||| || ||||| ||| || ||| ||||||||||||| | Sbjct 1975458 CTCAAGGCCATCTACAAGACGGTCTGGGAGATCAGCCAAAAGGCCATCATCGACATGTCC 1975517 Query 20678 GCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCG 20737 ||||| || ||||| | |||| ||| |||| | || || | || | ||| Sbjct 1975518 GCCGACCGTGGCGCTTTCATCTGCCAAAGCCAGAGCTTGAACATCCACTTGTCCAGCCCG 1975577 Query 20738 AGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGC 20797 | | | ||| | |||| ||| ||||| | ||| |||| | ||||| || ||||| ||| Sbjct 1975578 ACCTTTGCGCAACTGACCTCGATGCACTTTTACTCCTGGAAGAAGGGCCTTAAGACTGGC 1975637 Query 20798 ATG 20800 ||| Sbjct 1975638 ATG 1975640 >seq5 Length=3070904 Score = 86.0 bits (94), Expect = 7e-12 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 60039 ATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATT 60098 || ||||||||||| ||||| || | ||||||||||||| |||||||||||||| || Sbjct 1666802 ATATTCTGGCTCAAGAAGCGCGGTTTAATGCCGGGCCTGACCTTCTCCAACGAGCTCATC 1666861 Query 60099 TCCCGGGACGAGGGCCTCCA 60118 ||||| ||||| ||||| || Sbjct 1666862 TCCCGCGACGAAGGCCTGCA 1666881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524669725360