Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidiopsis_20lactophilus_20[genbank_20GCA_5F001599975.1_202016 -03-01] 19 sequences; 22,180,604 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1 132 1e-25 seq2 84.2 5e-11 >seq1 Length=5326569 Score = 132 bits (146), Expect = 1e-25 Identities = 133/173 (77%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || | |||||||| ||||| |||| ||||||||| || ||||| Sbjct 2645574 TTCTGGATGTTGTAGTCGGACAGGGTCCTGCCATCCTCCAACTGCTTGCCAGCAAAGATC 2645515 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 |||||||| |||||||| || | || ||||||||||||||||| || ||| ||| Sbjct 2645514 AGGCGTTGCTGGTCAGGTGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGGCGTCG 2645455 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTT 211099 || | ||| ||||| || ||||| | ||||| ||||| || || | ||||| Sbjct 2645454 ATCGAGTCGGAGCTCTCGACCTCCAAGGTGATGGTCTTGCCGGTCAAGGTCTT 2645402 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 ||||| ||||| || || | |||||||| || || || || || ||||| || ||||| Sbjct 2644534 TTTTGAATGTTGTAGTCAGACAGGGTCCTGCCGTCCTCGAGTTGTTTGCCAGCAAAGATG 2644475 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||||| |||||||| || |||| || ||||||||||| ||||| Sbjct 2644474 AGGCGCTGTTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTT 2644431 Score = 86.0 bits (94), Expect = 1e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || || ||||| ||||| || ||||| || || | || ||||||||||||||||| Sbjct 2644780 CTTTCCAGCRAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTT 2644721 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || ||| ||||| | ||| ||||| || || || | ||||| ||||| || || Sbjct 2644720 CGCCTTGACGGCGTCGATCGAGTCGGAGCTCTCGACTTCCAAGGTGATGGTCTTGCCGGT 2644661 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 | ||||| ||||| | ||||| Sbjct 2644660 CAAGGTCTTGACAAAGATTTGCAT 2644637 >seq2 Length=4543988 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || | || ||||| || || || ||||||||||| |||||||| Sbjct 1347249 TTCTGGATGTTGTAGTCAGACAGAGTCCTGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 1347308 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 | ||| || |||||||| || | ||| ||||| || || ||||| Sbjct 1347309 AAGCGCTGCTGGTCAGGGGGGATTCCCTCCTTATCTTGAATCTT 1347352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151717818935