Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidiopsis_20lactophilus_20[genbank_20GCA_5F001599975.1_202016 -03-01] 19 sequences; 22,180,604 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1 111 4e-19 seq2 89.7 1e-12 >seq1 Length=5326569 Score = 111 bits (122), Expect = 4e-19 Identities = 123/164 (75%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 || || || || |||||| | ||||| || ||||| ||| | ||||| |||||| Sbjct 2645411 ACCGGCAAGACCATCACCTTGGAGGTCGAGAGCTCCGACTCGATCGACGCCGTCAAGGCG 2645470 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| |||||||| || || ||||| || ||||||||||| || ||||| || || || Sbjct 2645471 AAGATCCAGGACAAGGAGGGCATCCCACCTGACCAGCAACGCCTGATCTTTGCTGGCAAG 2645530 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 ||| | || ||||| ||||| || |||| || ||| |||| || Sbjct 2645531 CAGTTGGAGGATGGCAGGACCCTGTCCGACTACAACATCCAGAA 2645574 >seq2 Length=4543988 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 |||||||| || || || |||||||| || |||||||| || | ||||||||||| || Sbjct 1347352 AAGATTCAAGATAAGGAGGGAATCCCCCCTGACCAGCAGCGCTTGATCTTCGCCGGCAAG 1347293 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 |||||||| || || |||||||| | || || ||| |||| || Sbjct 1347292 CAGCTCGAGGACGGCAGGACTCTGTCTGACTACAACATCCAGAA 1347249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730906966686