Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03-
01] 69 sequences; 21,721,408 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq6 136 3e-27
>seq6
Length=1290484
Score = 136 bits (150), Expect = 3e-27
Identities = 239/347 (69%), Gaps = 1/347 (0%)
Strand=Plus/Minus
Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986
|||||||| | ||| | ||||||||||| || ||||| | ||||| | ||||| |
Sbjct 354285 TTCCAAGCGCTCATGATGATCCTTCTATCCGTGGGGTTGTTCTTTATCTTGTCAATACAT 354226
Query 101987 TGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCT 102046
||||| | ||| || || |||| ||| ||||||| | ||| |||| |||
Sbjct 354225 TGTTTGAGTTGATCTACACCTTGTCCCGTATAATCAGCATCGGCACTCGTATACGTCGCT 354166
Query 102047 CCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAA 102106
|| ||||||||||| ||||| ||||| || ||||||||||| ||||| ||||| || |
Sbjct 354165 CCAAAATGCCTCCATTGAAAACCATAGACCGGTCCAAGATCGCCTTCCTCTCTATCTTTC 354106
Query 102107 AAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCT 102166
|| |||| ||||| | | | ||| || ||||| |||||||||| || ||| |
Sbjct 354105 AATCCAATCTTATCGAGATACTCTCTCGAACCATTTCCATCCCAAATATGAACGTCTTTA 354046
Query 102167 GCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACA 102226
|| ||| ||| ||| || || || | | ||||| | |||||||| | |||
Sbjct 354045 TCTTGTAGTAACTTGTTGTGTGTTGAACCGCGTACGAACCATAGGAGTTCTTCGATGACA 353986
Query 102227 CCTCTCCAAAATACTCTCTTAGTAGTTAA-AAGTGGAAATTCATTTT 102272
|| | ||| |||| || ||||| || ||| | | | |||| ||
Sbjct 353985 CCACGTGTAAAGACTCGTTTTGTAGTCAACAAGGGAAGAGTCATGTT 353939
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361250896210319
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |