Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03- 01] 69 sequences; 21,721,408 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq6 136 3e-27 >seq6 Length=1290484 Score = 136 bits (150), Expect = 3e-27 Identities = 239/347 (69%), Gaps = 1/347 (0%) Strand=Plus/Minus Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986 |||||||| | ||| | ||||||||||| || ||||| | ||||| | ||||| | Sbjct 354285 TTCCAAGCGCTCATGATGATCCTTCTATCCGTGGGGTTGTTCTTTATCTTGTCAATACAT 354226 Query 101987 TGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCT 102046 ||||| | ||| || || |||| ||| ||||||| | ||| |||| ||| Sbjct 354225 TGTTTGAGTTGATCTACACCTTGTCCCGTATAATCAGCATCGGCACTCGTATACGTCGCT 354166 Query 102047 CCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAA 102106 || ||||||||||| ||||| ||||| || ||||||||||| ||||| ||||| || | Sbjct 354165 CCAAAATGCCTCCATTGAAAACCATAGACCGGTCCAAGATCGCCTTCCTCTCTATCTTTC 354106 Query 102107 AAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCT 102166 || |||| ||||| | | | ||| || ||||| |||||||||| || ||| | Sbjct 354105 AATCCAATCTTATCGAGATACTCTCTCGAACCATTTCCATCCCAAATATGAACGTCTTTA 354046 Query 102167 GCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACA 102226 || ||| ||| ||| || || || | | ||||| | |||||||| | ||| Sbjct 354045 TCTTGTAGTAACTTGTTGTGTGTTGAACCGCGTACGAACCATAGGAGTTCTTCGATGACA 353986 Query 102227 CCTCTCCAAAATACTCTCTTAGTAGTTAA-AAGTGGAAATTCATTTT 102272 || | ||| |||| || ||||| || ||| | | | |||| || Sbjct 353985 CCACGTGTAAAGACTCGTTTTGTAGTCAACAAGGGAAGAGTCATGTT 353939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361250896210319