Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03- 01] 69 sequences; 21,721,408 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq6 113 3e-20 >seq6 Length=1290484 Score = 113 bits (124), Expect = 3e-20 Identities = 167/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 97291 TTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATC 97350 |||||||| | ||| | || |||||||| || ||||| | | ||| | | ||| Sbjct 354285 TTCCAAGCGCTCATGATGATCCTTCTATCCGTGGGGTTGTTCTTTATCTTGTCAATACAT 354226 Query 97351 TGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTG-ATATTCTGC 97409 || || | |||||| || |||| ||| ||||| || | | || | ||| || Sbjct 354225 TGTTTGAGTTGATCTACACCTTGTCCCGTATAATCA-GCATCGGCACTCGTATACGTCGC 354167 Query 97410 TCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACA 97469 |||||||||||||||||| || ||||| || |||||||| || ||||| |||||||| Sbjct 354166 TCCAAAATGCCTCCATTGAAAACCATAGACCGGTCCAAGATCGCCTTCCTCTCTATCTTT 354107 Query 97470 GAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCAC 97523 || |||| |||||| | ||| || || |||||| |||||||||| || || Sbjct 354106 CAATCCAATCTTATCGAGATACTCTCTCGAACCATTTCCATCCCAAATATGAAC 354053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783708376330