Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03- 01] 69 sequences; 21,721,408 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq18 104 3e-17 >seq18 Length=480229 Score = 104 bits (114), Expect = 3e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||| || ||||| |||||||| | ||||||| |||| || |||||||||||||| || Sbjct 342054 CTCTTTCTGAATGTTGTAATCCGAAAGAGTCCTTCCGTCCTCCAGCTGCTTACCAGCAAA 341995 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | |||||| ||||||| || | || |||||||| ||| || |||| | Sbjct 341994 AATCAATCGCTGTTGGTCGGGTGGGATGCCTTCCTTGTCTTGGATCTTGCTCTTGACATT 341935 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| || || || || | || || || ||||| || |||||||| || Sbjct 341934 ATCAATGGTGTCGGAAGACTCGACTTCCAAGGTAATTGTCTTGCCTGTCAGCGTCTTGAC 341875 Query 43172 AAAGATTTGCAT 43183 |||||| ||||| Sbjct 341874 AAAGATCTGCAT 341863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571817106807320