Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03-
01] 69 sequences; 21,721,408 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq18 95.1 1e-14
seq1 86.0 5e-12
>seq18
Length=480229
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||| |||||||||||||| || || | |||| ||||| || || || || ||
Sbjct 342054 CTCTTTCTGAATGTTGTAATCCGAAAGAGTCCTTCCGTCCTCCAGCTGCTTACCAGCAAA 341995
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
||||| |||||||||||||| || | || |||||||| || || ||| ||
Sbjct 341994 AATCAATCGCTGTTGGTCGGGTGGGATGCCTTCCTTGTCTTGGATCTTGCTCTTGACATT 341935
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | |||| | ||| || |||| |||||| |||||||| ||||| ||||| ||
Sbjct 341934 ATCAATGGTGTCGGAAGACTCGACTTCCAAGGTAATTGTCTTGCCTGTCAGCGTCTTGAC 341875
Query 45325 AAAGATTTGCAT 45336
|||||| |||||
Sbjct 341874 AAAGATCTGCAT 341863
>seq1
Length=2538488
Score = 86.0 bits (94), Expect = 5e-12
Identities = 86/112 (77%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| || ||| ||||||||| |||||||||||| || || |||| || || ||
Sbjct 607960 GTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGTCCGTCTTCGAGCTG 608019
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
||||| ||||| |||| |||||||||||||| || | ||||||||||||
Sbjct 608020 CTTTCCAGCGAAGATCAGTCGCTGTTGGTCGGGTGGGATGCCCTCCTTGTCC 608071
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395074867766449
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |