Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03-
01] 69 sequences; 21,721,408 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq2 93.3 4e-14
>seq2
Length=2148610
Score = 93.3 bits (102), Expect = 4e-14
Identities = 168/246 (68%), Gaps = 0/246 (0%)
Strand=Plus/Minus
Query 14200 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 14259
||| || ||||| || ||| || || |||||||| || || ||||| ||||| ||
Sbjct 698758 TAAGCAAGCAAAGTCGGTATGTAGACCTTCATCTCTCGAGATGAGCTCGTTGGAAAACGT 698699
Query 14260 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAA 14319
|| || ||||| | || || || || | |||||| || | ||| || || || || ||
Sbjct 698698 CAAGCCCGGCATGAGACCGCGCTTCTTGAGCCAAAAGATGGAAGCAAAAGAGCCAGAGAA 698639
Query 14320 GAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTT 14379
||| || ||||| || ||||||||||| | | ||||| ||||| | | | ||||
Sbjct 698638 GAAGATACCCTCTACAGCAGCAAACGCCACGATGCGTTCACCAAAGGTAGACTCCTTGTC 698579
Query 14380 CGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGC 14439
|| ||||| | |||||| || | ||| |||| | ||| |||| |||||
Sbjct 698578 TGAAATCCAGGTAAGAGCCCACTCGGCCTTTCGGGCAATAGGACGCATGGTTTGGATAGC 698519
Query 14440 ATTAAA 14445
||| ||
Sbjct 698518 ATTGAA 698513
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482345183976920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |