Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03- 01] 69 sequences; 21,721,408 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 3e-15 >seq2 Length=2148610 Score = 96.9 bits (106), Expect = 3e-15 Identities = 169/246 (69%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 13868 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 13927 ||| || ||||| || ||| || || |||||||| || || ||||| ||||| || Sbjct 698758 TAAGCAAGCAAAGTCGGTATGTAGACCTTCATCTCTCGAGATGAGCTCGTTGGAAAACGT 698699 Query 13928 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAA 13987 || || ||||| | || || || || | |||||| || | |||||| || || || || Sbjct 698698 CAAGCCCGGCATGAGACCGCGCTTCTTGAGCCAAAAGATGGAAGCAAAAGAGCCAGAGAA 698639 Query 13988 GAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTT 14047 ||| || ||||| || ||||||||||| | | ||||| ||||| | | | |||| Sbjct 698638 GAAGATACCCTCTACAGCAGCAAACGCCACGATGCGTTCACCAAAGGTAGACTCCTTGTC 698579 Query 14048 CGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGC 14107 || ||||| | |||||| || | ||| |||| | ||| |||| ||||| Sbjct 698578 TGAAATCCAGGTAAGAGCCCACTCGGCCTTTCGGGCAATAGGACGCATGGTTTGGATAGC 698519 Query 14108 ATTAAA 14113 ||| || Sbjct 698518 ATTGAA 698513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727586234600