Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03-
01] 69 sequences; 21,721,408 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq18 87.8 1e-12
>seq18
Length=480229
Score = 87.8 bits (96), Expect = 1e-12
Identities = 144/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 42906 ATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTG 42965
||||| ||| ||| || || | |||||||| || | || | | |||| |||| ||
Sbjct 342066 ATGGAGAGTAGACTCTTTCTGAATGTTGTAATCCGAAAGAGTCCTTCCGTCCTCCAGCTG 342007
Query 42966 TTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATC-A 43024
|| || |||||||||||||||||||| |||| || | ||||| || || ||||
Sbjct 342006 CTTACCAGCAAAAATCAATCGCTGTTGGTCGGGTGGGATGCCTTCCTTGTCTTGGATCTT 341947
Query 43025 ACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGG 43084
||| ||||| | ||| |||||| || |||||| || | || || || || || |
Sbjct 341946 GCTC-TTGACATTATCAATGGTGTCGGAAGACTCGACTTCCAAGGTAATTGTCTTGCCTG 341888
Query 43085 TTAGAGTTTTCACAAAAATTTGCAT 43109
| || || || ||||| || |||||
Sbjct 341887 TCAGCGTCTTGACAAAGATCTGCAT 341863
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381369279292002
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |