Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03- 01] 69 sequences; 21,721,408 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq6 93.3 5e-14 >seq6 Length=1290484 Score = 93.3 bits (102), Expect = 5e-14 Identities = 236/346 (68%), Gaps = 11/346 (3%) Strand=Plus/Minus Query 7063 GGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTA-T 7121 || |||||||| |||| | || | |||||| | || || ||| || || |||| | | Sbjct 354288 GGGTTCCAAGCGCTCATGATGATCCTTCTATCCGTGGGGTT-GTTCTTTATCTTGTCAAT 354230 Query 7122 A-ATTATTTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAAT 7180 | ||| |||| | |||||||| ||| || || ||||| || || | | |||| Sbjct 354229 ACATTGTTTG-AGTTGATCTACACCTTGTCCCGTATAATCAGCATCGGCACTCGTATACG 354171 Query 7181 TAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTTCACGAT 7240 | ||||||||||| ||||||||||| ||||| | || || | ||| ||||| || | || Sbjct 354170 TCGCTCCAAAATGCCTCCATTGAAAACCATAGACCGGTCCAAGATCGCCTTCCTCTCTAT 354111 Query 7241 GATTAAATCCTAATC-GATTTAAATTAGATTTTGATCCATAAGCATCCCAAATATGTACA 7299 || ||||| |||| || | || | | || |||| ||||||||||||| || Sbjct 354110 CTTTCAATCC-AATCTTATCGAGATACTCTCTCGAACCATTTCCATCCCAAATATGAACG 354052 Query 7300 GAttt-ttttG-ATAAATTTAAAGAATTTGTAGATCCTTTAAGGAACCATAAAAGTTCTT 7357 ||| | ||| | || || | | ||| || || | |||||||| ||||||| Sbjct 354051 TCTTTATCTTGTAGTAACTTGTTG--TGTGTTGAACCGCGTACGAACCATAGGAGTTCTT 353994 Query 7358 CTACTATTCCACGCCAAAACATTCTTTTTGTAGTGAATAAAGGGAA 7403 | | | ||||| ||| | || ||||||||| || ||||||| Sbjct 353993 CGATGACACCACGTGTAAAGACTCGTTTTGTAGTCAA-CAAGGGAA 353949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871486060400