Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03- 01] 69 sequences; 21,721,408 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq16 136 6e-27 >seq16 Length=487666 Score = 136 bits (150), Expect = 6e-27 Identities = 198/277 (71%), Gaps = 2/277 (1%) Strand=Plus/Minus Query 193842 GAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGCAAAGTTGTATGGTTATTGG 193901 |||| ||||| || | || |||||||| || |||||||| ||| | || | || ||| Sbjct 197569 GAAAAGACACCCTTCTACCCTCGCTCTCCCTACGGTGTAGCGAAGCTATACGCCTACTGG 197510 Query 193902 ATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCTAGTTCTGGTATTCTCTTCAAT 193961 || |||| ||||| || ||||| ||||| | ||||| | ||| ||||| |||||| Sbjct 197509 ATAGTCAAAAATTACCGCGAGTCTTATGGTATGCACGCATCTAATGGAATTCTTTTCAAT 197450 Query 193962 CACGAATCTCCAAGAAGAGGTGAG-ACATTTGTAACTCGTAAGATTACACAAGGTTTATC 194020 |||||||| ||||||||||| ||| ||||| || || ||||| || || | | | | Sbjct 197449 CACGAATCGCCAAGAAGAGG-GAGAACATTCGTCACGCGTAAAATAACGCGGGCCGTGGC 197391 Query 194021 TAAGATCTCTGTTGGATTACAGAAGATTCTTTATCTTGGTAATCTTAATGCTAAGAGGGA 194080 | ||||| | || | ||| | |||||| || || || || |||| | | | || Sbjct 197390 CGAAATCTCGATGGGTGTTCAGGATTGTCTTTACCTGGGGAACCTGGATGCGATGCGTGA 197331 Query 194081 TTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGG 194117 |||||||| || | || |||||||||| |||||| Sbjct 197330 CTGGGGACATGCTAGAGACTATGTTGAAGGAATGTGG 197294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807554503483640