Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03-
01] 69 sequences; 21,721,408 total letters
Query= NC_006883.2
Length=252401
Score E
Sequences producing significant alignments: (Bits) Value
seq16 136 6e-27
>seq16
Length=487666
Score = 136 bits (150), Expect = 6e-27
Identities = 198/277 (71%), Gaps = 2/277 (1%)
Strand=Plus/Minus
Query 193842 GAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGCAAAGTTGTATGGTTATTGG 193901
|||| ||||| || | || |||||||| || |||||||| ||| | || | || |||
Sbjct 197569 GAAAAGACACCCTTCTACCCTCGCTCTCCCTACGGTGTAGCGAAGCTATACGCCTACTGG 197510
Query 193902 ATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCTAGTTCTGGTATTCTCTTCAAT 193961
|| |||| ||||| || ||||| ||||| | ||||| | ||| ||||| ||||||
Sbjct 197509 ATAGTCAAAAATTACCGCGAGTCTTATGGTATGCACGCATCTAATGGAATTCTTTTCAAT 197450
Query 193962 CACGAATCTCCAAGAAGAGGTGAG-ACATTTGTAACTCGTAAGATTACACAAGGTTTATC 194020
|||||||| ||||||||||| ||| ||||| || || ||||| || || | | | |
Sbjct 197449 CACGAATCGCCAAGAAGAGG-GAGAACATTCGTCACGCGTAAAATAACGCGGGCCGTGGC 197391
Query 194021 TAAGATCTCTGTTGGATTACAGAAGATTCTTTATCTTGGTAATCTTAATGCTAAGAGGGA 194080
| ||||| | || | ||| | |||||| || || || || |||| | | | ||
Sbjct 197390 CGAAATCTCGATGGGTGTTCAGGATTGTCTTTACCTGGGGAACCTGGATGCGATGCGTGA 197331
Query 194081 TTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGG 194117
|||||||| || | || |||||||||| ||||||
Sbjct 197330 CTGGGGACATGCTAGAGACTATGTTGAAGGAATGTGG 197294
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 807554503483640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |