Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03-
01] 69 sequences; 21,721,408 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq5 111 2e-19
seq2 102 1e-16
>seq5
Length=1549313
Score = 111 bits (122), Expect = 2e-19
Identities = 204/299 (68%), Gaps = 0/299 (0%)
Strand=Plus/Minus
Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052
|||||||| ||||| || | | || ||| || |||| | ||||| | | | |
Sbjct 643766 TCGAACTCCTCTCCATGCACTTCATGCATTCCGGGCGCTTCAGCGGGACAGAAAAGAGGC 643707
Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63112
|| || |||| | || |||||| ||| || | || |||||||||||||| | ||
Sbjct 643706 CAGTCACCGTTCTGCTCGACTCGTCGCATGAACATGTCTGGAATCCAAAGAGCAAAGAAA 643647
Query 63113 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63172
|| ||||| | ||| ||| || ||||| |||||| ||||| ||||| | |
Sbjct 643646 AGGTCTCTAGCTCTGACTTCTTCTTTTCCGTGATTCTTGCGGAGATCAAGGAAGTCAAAG 643587
Query 63173 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63232
||||| | |||||| || || | ||| || || | | ||||| || ||||| || |||
Sbjct 643586 ATATCTGCATGCCATGGCTCGATGTAGATAGCAAAGGCACCAGGTCGCTTGTTGCCACCC 643527
Query 63233 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 63291
||||| | || | || || || || |||||| || ||| || | |||||||||||
Sbjct 643526 TGATCAACATAACGCGCAGTATTGTTGAAAACTCGCAGCATCGGTACGATACCATTGGA 643468
>seq2
Length=2148610
Score = 102 bits (112), Expect = 1e-16
Identities = 110/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 32658 AAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTG 32717
|| || || || ||| |||||||| || ||||| || | ||||||||||||||
Sbjct 698757 AAGCAAGCAAAGTCGGTATGTAGACCTTCATCTCTCGAGATGAGCTCGTTGGAAAACGTC 698698
Query 32718 AGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAG 32777
| || ||||| || || ||||| || |||||||| ||||| ||||| || ||||| |||
Sbjct 698697 AAGCCCGGCATGAGACCGCGCTTCTTGAGCCAAAAGATGGAAGCAAAAGAGCCAGAGAAG 698638
Query 32778 AAAATTCCTTCTACTGCCGCAAAGGC 32803
|| || || ||||| || ||||| ||
Sbjct 698637 AAGATACCCTCTACAGCAGCAAACGC 698612
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631453492400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |