Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03- 01] 69 sequences; 21,721,408 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq2 149 7e-31 >seq2 Length=2148610 Score = 149 bits (164), Expect = 7e-31 Identities = 220/309 (71%), Gaps = 6/309 (2%) Strand=Plus/Minus Query 93088 TAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGT 93147 |||||| |||||||||||||||| |||||| |||| || || | ||| ||| || || Sbjct 698758 TAAGCAAGCAAAGTCGGTATGTAGACCTTCATCTCTCGAGATGAGCTCGTTGGAAAACGT 698699 Query 93148 TAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaa 93207 || || || | || || || |||||||||||||| || ||||||||| ||||| || Sbjct 698698 CAAGCCCGGCATGAGACCGCGCTTCTTGAGCCAAAAGATGGAAGCAAAAGAGCCAGAGAA 698639 Query 93208 aaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACT 93267 || ||||| || || || ||||| ||||| || ||||| |||| | || | | Sbjct 698638 GAAGATACCCTCTACAGCAGCAAACGCCACGATGCGTTCACCAAA---GGTAGACTCCTT 698582 Query 93268 G-CTG--ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGAT 93324 | ||| ||||| | | |||||| ||||| ||| |||| | | | |||| ||| Sbjct 698581 GTCTGAAATCCAGGTAAGAGCCCACTCGGCCTTTCGGGCAATAGGACGCATGGTTTGGAT 698522 Query 93325 AGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGA 93384 ||| || || || | ||||||| |||| || || |||||||||||||| | || || Sbjct 698521 AGCATTGAAGAGCTTGACTCGCTCTGCCGACTCGCGAATGTATGTATCGATGAGGAGTGA 698462 Query 93385 ATACATTTC 93393 || | ||| Sbjct 698461 GTAGACTTC 698453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860319707560