Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03-
01] 69 sequences; 21,721,408 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq2 149 7e-31
>seq2
Length=2148610
Score = 149 bits (164), Expect = 7e-31
Identities = 220/309 (71%), Gaps = 6/309 (2%)
Strand=Plus/Minus
Query 93088 TAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGT 93147
|||||| |||||||||||||||| |||||| |||| || || | ||| ||| || ||
Sbjct 698758 TAAGCAAGCAAAGTCGGTATGTAGACCTTCATCTCTCGAGATGAGCTCGTTGGAAAACGT 698699
Query 93148 TAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaa 93207
|| || || | || || || |||||||||||||| || ||||||||| ||||| ||
Sbjct 698698 CAAGCCCGGCATGAGACCGCGCTTCTTGAGCCAAAAGATGGAAGCAAAAGAGCCAGAGAA 698639
Query 93208 aaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACT 93267
|| ||||| || || || ||||| ||||| || ||||| |||| | || | |
Sbjct 698638 GAAGATACCCTCTACAGCAGCAAACGCCACGATGCGTTCACCAAA---GGTAGACTCCTT 698582
Query 93268 G-CTG--ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGAT 93324
| ||| ||||| | | |||||| ||||| ||| |||| | | | |||| |||
Sbjct 698581 GTCTGAAATCCAGGTAAGAGCCCACTCGGCCTTTCGGGCAATAGGACGCATGGTTTGGAT 698522
Query 93325 AGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGA 93384
||| || || || | ||||||| |||| || || |||||||||||||| | || ||
Sbjct 698521 AGCATTGAAGAGCTTGACTCGCTCTGCCGACTCGCGAATGTATGTATCGATGAGGAGTGA 698462
Query 93385 ATACATTTC 93393
|| | |||
Sbjct 698461 GTAGACTTC 698453
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860319707560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |