Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03- 01] 69 sequences; 21,721,408 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 2e-14 >seq2 Length=2148610 Score = 95.1 bits (104), Expect = 2e-14 Identities = 118/159 (74%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 42708 GTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGG 42767 || || ||| | || || ||||| ||||||||||| ||| | || || |||||||| ||| Sbjct 698609 GTGGCGTTTGCTGCTGTAGAGGGTATCTTCTTCTCTGGCTCTTTTGCTTCCATCTTTTGG 698668 Query 42768 CTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGA 42826 |||||| || ||| || ||||| || | || || || ||||| |||||| || || Sbjct 698669 CTCAAGAAGCGCGGTCTC-ATGCCGGGCTTGACGTTTTCCAACGAGCTCATCTCGAGAGA 698727 Query 42827 CGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTC 42865 || || || |||| |||||||| ||| | || ||||| Sbjct 698728 TGAAGGTCTACATACCGACTTTGCTTGCTTACTCTTCTC 698766 Score = 86.0 bits (94), Expect = 1e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 42921 GCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATG 42980 ||||| || ||||||||||||||||| || || | || || || || |||| ||| Sbjct 698887 GCCGTTGACATCGAGAAGGAGTTCCTTACAAAGGCCCTCCCTGTCGGTCTCATCGGAATG 698946 Query 42981 AACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCT 43030 ||| | | |||||||||| |||||||| ||| |||||||||| ||| || Sbjct 698947 AACGATGTCCTCATGTGCCAGTACATCGAGTTTGTCGCCGACCGTCTTCT 698996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338385507440