Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03-
01] 69 sequences; 21,721,408 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq2 95.1 2e-14
>seq2
Length=2148610
Score = 95.1 bits (104), Expect = 2e-14
Identities = 118/159 (74%), Gaps = 2/159 (1%)
Strand=Plus/Plus
Query 42708 GTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGG 42767
|| || ||| | || || ||||| ||||||||||| ||| | || || |||||||| |||
Sbjct 698609 GTGGCGTTTGCTGCTGTAGAGGGTATCTTCTTCTCTGGCTCTTTTGCTTCCATCTTTTGG 698668
Query 42768 CTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGA 42826
|||||| || ||| || ||||| || | || || || ||||| |||||| || ||
Sbjct 698669 CTCAAGAAGCGCGGTCTC-ATGCCGGGCTTGACGTTTTCCAACGAGCTCATCTCGAGAGA 698727
Query 42827 CGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTC 42865
|| || || |||| |||||||| ||| | || |||||
Sbjct 698728 TGAAGGTCTACATACCGACTTTGCTTGCTTACTCTTCTC 698766
Score = 86.0 bits (94), Expect = 1e-11
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 42921 GCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATG 42980
||||| || ||||||||||||||||| || || | || || || || |||| |||
Sbjct 698887 GCCGTTGACATCGAGAAGGAGTTCCTTACAAAGGCCCTCCCTGTCGGTCTCATCGGAATG 698946
Query 42981 AACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCT 43030
||| | | |||||||||| |||||||| ||| |||||||||| ||| ||
Sbjct 698947 AACGATGTCCTCATGTGCCAGTACATCGAGTTTGTCGCCGACCGTCTTCT 698996
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944338385507440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |