Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03-
01] 69 sequences; 21,721,408 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq2 104 4e-17
seq5 100 5e-16
>seq2
Length=2148610
Score = 104 bits (114), Expect = 4e-17
Identities = 125/170 (74%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973
|| || | ||| ||||||||| || || || || || | ||||||| |||||||||
Sbjct 698763 AAGAGTAAGCAAGCAAAGTCGGTATGTAGACCTTCATCTCTCGAGATGAGCTCGTTGGAA 698704
Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033
| | | ||||||||||| || ||| ||||||||||| |||| ||||||| ||
Sbjct 698703 AACGTCAAGCCCGGCATGAGACCGCGCTTCTTGAGCCAAAAGATGGAAGCAAAAGAGCCA 698644
Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAA 160083
|| ||||| ||||| || || ||||||||||||| | ||||||||
Sbjct 698643 GAGAAGAAGATACCCTCTACAGCAGCAAACGCCACGATGCGTTCACCAAA 698594
>seq5
Length=1549313
Score = 100 bits (110), Expect = 5e-16
Identities = 154/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 203846 ACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTTT 203905
|| ||||||||||| ||| ||| |||| | || ||| ||||||||||| || || ||
Sbjct 644974 ACAGTGAACTGAATCGCGCCCACAGCAGCCTTGGTTCGGAGATAGTACATTCCCGTTTTC 644915
Query 203906 AGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAG-TTTGCTCACGTTGGGGTCGGC 203964
| ||||||| ||||||||| | ||||||||| | || | ||| | || || | |
Sbjct 644914 AATCCCTTCTTCCACCCGTAAAAGTGCATGGATGTGAGCTGTGCGAATGTAGGCGATTG- 644856
Query 203965 CATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATT 204024
|| ||| | |||||| || || ||||| ||||| || | || || || | ||| |
Sbjct 644855 CAAGTGTACGTTCAGTGATTGTGACTGGTCAATGAACGGACCACGGTCAGCAGACATGTC 644796
Query 204025 GATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061
||| |||| || || |||||||| || ||||||
Sbjct 644795 GATGATGGCTTTTTGGCTGATCTCCCAGACTGTCTTG 644759
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795154514178640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |