Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03- 01] 69 sequences; 21,721,408 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq2 104 4e-17 seq5 100 5e-16 >seq2 Length=2148610 Score = 104 bits (114), Expect = 4e-17 Identities = 125/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973 || || | ||| ||||||||| || || || || || | ||||||| ||||||||| Sbjct 698763 AAGAGTAAGCAAGCAAAGTCGGTATGTAGACCTTCATCTCTCGAGATGAGCTCGTTGGAA 698704 Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033 | | | ||||||||||| || ||| ||||||||||| |||| ||||||| || Sbjct 698703 AACGTCAAGCCCGGCATGAGACCGCGCTTCTTGAGCCAAAAGATGGAAGCAAAAGAGCCA 698644 Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAA 160083 || ||||| ||||| || || ||||||||||||| | |||||||| Sbjct 698643 GAGAAGAAGATACCCTCTACAGCAGCAAACGCCACGATGCGTTCACCAAA 698594 >seq5 Length=1549313 Score = 100 bits (110), Expect = 5e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 203846 ACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTTT 203905 || ||||||||||| ||| ||| |||| | || ||| ||||||||||| || || || Sbjct 644974 ACAGTGAACTGAATCGCGCCCACAGCAGCCTTGGTTCGGAGATAGTACATTCCCGTTTTC 644915 Query 203906 AGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAG-TTTGCTCACGTTGGGGTCGGC 203964 | ||||||| ||||||||| | ||||||||| | || | ||| | || || | | Sbjct 644914 AATCCCTTCTTCCACCCGTAAAAGTGCATGGATGTGAGCTGTGCGAATGTAGGCGATTG- 644856 Query 203965 CATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATT 204024 || ||| | |||||| || || ||||| ||||| || | || || || | ||| | Sbjct 644855 CAAGTGTACGTTCAGTGATTGTGACTGGTCAATGAACGGACCACGGTCAGCAGACATGTC 644796 Query 204025 GATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 ||| |||| || || |||||||| || |||||| Sbjct 644795 GATGATGGCTTTTTGGCTGATCTCCCAGACTGTCTTG 644759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154514178640