Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03- 01] 69 sequences; 21,721,408 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1 107 2e-18 seq18 102 9e-17 >seq1 Length=2538488 Score = 107 bits (118), Expect = 2e-18 Identities = 122/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || || || |||| ||||||||||| || ||||| Sbjct 607972 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGTCCGTCTTCGAGCTGCTTTCCAGCGAA 608031 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||| ||||||| || | || |||||||||| |||||| ||||| | Sbjct 608032 GATCAGTCGCTGTTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 608091 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGC 46565 | | |||||| || || || || | |||||||| |||| Sbjct 608092 GTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGC 608135 >seq18 Length=480229 Score = 102 bits (112), Expect = 9e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||||||||| || |||||| || || ||||| || ||||| || || | || ||| Sbjct 341843 ACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAATCTGATAGCGTACGTCCATCTTCG 341784 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| || || || ||||| ||||| ||||||| || | || ||| || || Sbjct 341783 AGCTGCTTTCCAGCAAAGATCAATCGCTGTTGGTCGGGTGGAATGCCCTCTTTATCTTGA 341724 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||| ||||| ||| | | | || || ||||| || |||| || || || || Sbjct 341723 ATCTTGGACTTGA-CGTTGTCAATGGTATCAGAAGATTCTACCTCCAGGGTAATTGTCTT 341665 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| ||||| || || || ||||| ||||| Sbjct 341664 GCCAGTCAGGGTCTTTACGAAGATCTGCAT 341635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237912481880