Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03-
01] 69 sequences; 21,721,408 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq18 111 1e-19
>seq18
Length=480229
Score = 111 bits (122), Expect = 1e-19
Identities = 151/211 (72%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
||||| |||| ||| ||| ||||| ||||||||||| || ||| ||||| |||| ||
Sbjct 341616 AACCAGATGAAGGGTGGATTCCTTCTGGATGTTATAGTCTGAGAGGGTTCGTCCATCCTC 341557
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
| || || ||||| || || || ||||| ||||| |||| | |||||||||||
Sbjct 341556 TAATTGCTTCCCGGCGAAGATAAGACGTTGTTGGTCGGGCGGAATGCCCTCCTTGTCCTG 341497
Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951
||||| |||||| | || | ||| | ||| || || | || ||||| ||
Sbjct 341496 GATCTTGCTCTTGACGTTGTCGATGGTATCAGATGACTCCACCTCAAGAGTGATGGTCTT 341437
Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
||| || | |||||||| ||||||||||||
Sbjct 341436 TCCGGTCAAGGTCTTCACGAAGATCTGCATA 341406
Score = 86.0 bits (94), Expect = 4e-12
Identities = 138/196 (70%), Gaps = 8/196 (4%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|||||||||||||| || |||||||| | | | | || |||||||| || || |||||
Sbjct 342053 TCTTTCTGAATGTTGTAATCCGAAAGAGTCCTTCCGTCCTCCAGCTGCTTACCAGCAAAA 341994
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| | ||| || ||||| | || | || |||||||| ||||| ||||| ||
Sbjct 341993 ATCAATCGCTGTTGGTCGGGTGGGATGCCTTCCTTGTCTTGGATCTTGCTCTTGAC--AT 341936
Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
|||| || || | ||| || || | ||| || || || || || || |||||
Sbjct 341935 --TATCAATGGTGTCGGAAGACTCGACTTCCAAGGTAATTGTCTTGCCTGTCAGCGTCTT 341878
Query 34967 CACAAAGATCTGCATA 34982
|||||||||||||||
Sbjct 341877 GACAAAGATCTGCATA 341862
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324633327003432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |