Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03- 01] 69 sequences; 21,721,408 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq18 118 8e-22 >seq18 Length=480229 Score = 118 bits (130), Expect = 8e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| | ||||||||| ||||| || || || || || || | || |||| |||| || Sbjct 341616 AACCAGATGAAGGGTGGATTCCTTCTGGATGTTATAGTCTGAGAGGGTTCGTCCATCCTC 341557 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 |||||||| || || || || | ||| ||||| |||||||||||||| || || || || Sbjct 341556 TAATTGCTTCCCGGCGAAGATAAGACGTTGTTGGTCGGGCGGAATGCCCTCCTTGTCCTG 341497 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 || || || || | || | || ||||| | ||||| |||||||||| || || Sbjct 341496 GATCTTGCTCTTGACGTTGTCGATGGTATCAGATGACTCCACCTCAAGAGTGATGGTCTT 341437 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || || || || || |||||||| Sbjct 341436 TCCGGTCAAGGTCTTCACGAAGATCTGCAT 341407 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| | ||| ||||| || || || || || |||||||| | | || | |||| || Sbjct 341844 AACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAATCTGATAGCGTACGTCCATCTTC 341785 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 | ||||| || ||||| ||||| |||||||| ||||| |||||||| ||||||||||| Sbjct 341784 GAGCTGCTTTCCAGCAAAGATCAATCGCTGTTGGTCGGGTGGAATGCCCTCTTTATCTTG 341725 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 ||| || || || | || | || ||||| | ||| || || || || | || || Sbjct 341724 AATCTTGGACTTGACGTTGTCAATGGTATCAGAAGATTCTACCTCCAGGGTAATTGTCTT 341665 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||| || | || ||||| || |||||||| Sbjct 341664 GCCAGTCAGGGTCTTTACGAAGATCTGCAT 341635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396278066754633