Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03- 01] 69 sequences; 21,721,408 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq5 131 9e-26 >seq5 Length=1549313 Score = 131 bits (144), Expect = 9e-26 Identities = 174/242 (72%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 25892 GGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATC 25951 |||||||| | | |||| ||| | || ||||| ||| ||| || | ||||||||| Sbjct 643721 GGACAGAAAAGAGGCCAGTCACCGTTCTGCTCGACTCGTCGCATGAACATGTCTGGAATC 643662 Query 25952 CACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGA 26011 || | ||| | || | ||||| ||||| | ||||||||||||||||||||| ||| Sbjct 643661 CAAAGAGCAAAGAAAAGGTCTCTAGCTCTGACTTCTTCTTTTCCGTGATTCTTGCGGAGA 643602 Query 26012 TCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTT 26071 || | ||| ||||| ||||||| |||||||| || | ||||||||||| ||| | Sbjct 643601 TCAAGGAAGTCAAAGATATCTGCATGCCATGGCTCGATGTAGATAGCAAAGGCACCAGGT 643542 Query 26072 CTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGA 26131 | || ||||| ||||| || || | ||||| | ||||||||| || ||| || Sbjct 643541 CGCTTGTTGCCACCCTGATCAACATAACGCGCAGTATTGTTGAAAACTCGCAGCATCGGT 643482 Query 26132 AC 26133 || Sbjct 643481 AC 643480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039787209175