Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03-
01] 69 sequences; 21,721,408 total letters
Query= NC_020851.1
Length=208007
Score E
Sequences producing significant alignments: (Bits) Value
seq16 140 4e-28
>seq16
Length=487666
Score = 140 bits (154), Expect = 4e-28
Identities = 193/270 (71%), Gaps = 0/270 (0%)
Strand=Plus/Plus
Query 47835 CCACATAGCCTCGACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCC 47894
|||||| | || ||||| ||||| ||||||||||||||||| | ||||| || || ||
Sbjct 197294 CCACATTCCTTCAACATAGTCTCTAGCATGTCCCCAGTCACGCATCGCATCCAGGTTCCC 197353
Query 47895 TAGATATAAACAGTCTTGCTTACCTTCAGAGATTGCTTTTAATGCTCTTGTAATCTTACG 47954
|| || | ||| || || ||| |||||| | | || | || || |||||
Sbjct 197354 CAGGTAAAGACAATCCTGAACACCCATCGAGATTTCGGCCACGGCCCGCGTTATTTTACG 197413
Query 47955 AGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGC 48014
|| || || ||| || | |||||| ||||| ||||| |||||||| ||| || | ||
Sbjct 197414 CGTGACGAATGTTCTCCCTCTTCTTGGCGATTCGTGATTGAAAAGAATTCCATTAGATGC 197473
Query 48015 ATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAAC 48074
| ||| || || || || || || || || ||||||||||| | || || || || ||
Sbjct 197474 GTGCATACCATAAGACTCGCGGTAATTTTTGACTATCCAGTAGGCGTATAGCTTCGCTAC 197533
Query 48075 ACCATAAGGAGAACGTGGATAGAAAGGTGT 48104
||| || ||||| || || ||||| |||||
Sbjct 197534 ACCGTAGGGAGAGCGAGGGTAGAAGGGTGT 197563
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 665493826011080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |