Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03- 01] 69 sequences; 21,721,408 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq16 140 4e-28 >seq16 Length=487666 Score = 140 bits (154), Expect = 4e-28 Identities = 193/270 (71%), Gaps = 0/270 (0%) Strand=Plus/Plus Query 47835 CCACATAGCCTCGACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCC 47894 |||||| | || ||||| ||||| ||||||||||||||||| | ||||| || || || Sbjct 197294 CCACATTCCTTCAACATAGTCTCTAGCATGTCCCCAGTCACGCATCGCATCCAGGTTCCC 197353 Query 47895 TAGATATAAACAGTCTTGCTTACCTTCAGAGATTGCTTTTAATGCTCTTGTAATCTTACG 47954 || || | ||| || || ||| |||||| | | || | || || ||||| Sbjct 197354 CAGGTAAAGACAATCCTGAACACCCATCGAGATTTCGGCCACGGCCCGCGTTATTTTACG 197413 Query 47955 AGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGC 48014 || || || ||| || | |||||| ||||| ||||| |||||||| ||| || | || Sbjct 197414 CGTGACGAATGTTCTCCCTCTTCTTGGCGATTCGTGATTGAAAAGAATTCCATTAGATGC 197473 Query 48015 ATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAAC 48074 | ||| || || || || || || || || ||||||||||| | || || || || || Sbjct 197474 GTGCATACCATAAGACTCGCGGTAATTTTTGACTATCCAGTAGGCGTATAGCTTCGCTAC 197533 Query 48075 ACCATAAGGAGAACGTGGATAGAAAGGTGT 48104 ||| || ||||| || || ||||| ||||| Sbjct 197534 ACCGTAGGGAGAGCGAGGGTAGAAGGGTGT 197563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665493826011080