Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03- 01] 69 sequences; 21,721,408 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq18 118 2e-21 >seq18 Length=480229 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||||||||| | || | ||| | ||||| |||||| || || ||||| || Sbjct 342090 ACCACCTCTAAGACGGAGGACGAGATGGAGAGTAGACTCTTTCTGAATGTTGTAATCCGA 342031 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 | || | | | || |||| || ||||||||||| || |||| |||||| || ||||| Sbjct 342030 AAGAGTCCTTCCGTCCTCCAGCTGCTTACCAGCAAAAATCAATCGCTGTTGGTCGGGTGG 341971 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || ||||| || ||||| || || | || |||||| || | || || || || || Sbjct 341970 GATGCCTTCCTTGTCTTGGATCTTGCTCTTGACATTATCAATGGTGTCGGAAGACTCGAC 341911 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||| | ||||| || || || || | || || | ||| |||||||| Sbjct 341910 TTCCAAGGTAATTGTCTTGCCTGTCAGCGTCTTGACAAAGATCTGCAT 341863 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||||| || || | || | ||| | || | ||| || || || ||||| Sbjct 341864 ATACCACCTCGCAGCCGAAGAACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAATCT 341805 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 |||| || ||| |||| || | || || ||||||||||| |||| |||||| || ||| Sbjct 341804 GATAGCGTACGTCCATCTTCGAGCTGCTTTCCAGCAAAGATCAATCGCTGTTGGTCGGGT 341745 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || ||||||||||| || || || || || || | ||| || |||||| Sbjct 341744 GGAATGCCCTCTTTATCTTGAATCTTGGACTTGACGTTGTCAATGGTATCAGAAGATTCT 341685 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || ||||| || || ||||| | || || | || |||||||| Sbjct 341684 ACCTCCAGGGTAATTGTCTTGCCAGTCAGGGTCTTTACGAAGATCTGCAT 341635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984479129658150