Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03-
01] 69 sequences; 21,721,408 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq2 102 1e-15
>seq2
Length=2148610
Score = 102 bits (112), Expect = 1e-15
Identities = 89/111 (80%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 868810 GAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGAT 868869
||| || |||||||||||||||||||||||||||||||||||| | ||||||| |||||
Sbjct 698997 GAGAAGACGGTCGGCGACAAACTCGATGTACTGGCACATGAGGACATCGTTCATTCCGAT 698938
Query 868870 GAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGC 868920
||| | || || || | || | | ||||| |||||||| || |||||
Sbjct 698937 GAGACCGACAGGGAGGGCCTTTGTAAGGAACTCCTTCTCGATGTCAACGGC 698887
Score = 95.1 bits (104), Expect = 1e-13
Identities = 128/172 (74%), Gaps = 11/172 (6%)
Strand=Plus/Minus
Query 869201 TCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGG-CGCA 869259
|||||| ||| | | ||| |||||||| ||||||||||||||||||||||||| |||
Sbjct 698712 TCGTTGGAAAACGTCAAGCCCGGCATGAGACCGCGCTTCTTGAGCCAAAAGATGGAAGCA 698653
Query 869260 GAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAA 869319
||| ||| ||||| ||||| ||||| || || ||||| | | || || || ||||
Sbjct 698652 -AAAGAGCCAGAGAAGAAGATACCCTCTACAGCAGCAAACGCCACGATGCGTTCACCAAA 698594
Query 869320 GGTGTCGAGGCCCTCCTTGT-TG--ATCCACTTCATCGCCCAGTCGGCCTTT 869368
||| || |||||||| || ||||| | | ||||| |||||||||
Sbjct 698593 GGT----AG--ACTCCTTGTCTGAAATCCAGGTAAGAGCCCACTCGGCCTTT 698548
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107133537536873
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |