Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03- 01] 69 sequences; 21,721,408 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq2 102 1e-15 >seq2 Length=2148610 Score = 102 bits (112), Expect = 1e-15 Identities = 89/111 (80%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 868810 GAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGAT 868869 ||| || |||||||||||||||||||||||||||||||||||| | ||||||| ||||| Sbjct 698997 GAGAAGACGGTCGGCGACAAACTCGATGTACTGGCACATGAGGACATCGTTCATTCCGAT 698938 Query 868870 GAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGC 868920 ||| | || || || | || | | ||||| |||||||| || ||||| Sbjct 698937 GAGACCGACAGGGAGGGCCTTTGTAAGGAACTCCTTCTCGATGTCAACGGC 698887 Score = 95.1 bits (104), Expect = 1e-13 Identities = 128/172 (74%), Gaps = 11/172 (6%) Strand=Plus/Minus Query 869201 TCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGG-CGCA 869259 |||||| ||| | | ||| |||||||| ||||||||||||||||||||||||| ||| Sbjct 698712 TCGTTGGAAAACGTCAAGCCCGGCATGAGACCGCGCTTCTTGAGCCAAAAGATGGAAGCA 698653 Query 869260 GAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAA 869319 ||| ||| ||||| ||||| ||||| || || ||||| | | || || || |||| Sbjct 698652 -AAAGAGCCAGAGAAGAAGATACCCTCTACAGCAGCAAACGCCACGATGCGTTCACCAAA 698594 Query 869320 GGTGTCGAGGCCCTCCTTGT-TG--ATCCACTTCATCGCCCAGTCGGCCTTT 869368 ||| || |||||||| || ||||| | | ||||| ||||||||| Sbjct 698593 GGT----AG--ACTCCTTGTCTGAAATCCAGGTAAGAGCCCACTCGGCCTTT 698548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107133537536873