Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03- 01] 69 sequences; 21,721,408 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 2e-12 >seq2 Length=2148610 Score = 91.5 bits (100), Expect = 2e-12 Identities = 183/268 (68%), Gaps = 9/268 (3%) Strand=Plus/Minus Query 794379 GCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAA 794438 ||| |||||||| ||||||||||||||||||||||||| | ||| ||| ||||| || Sbjct 698695 GCCCGGCATGAGACCGCGCTTCTTGAGCCAAAAGATGGAAGCAAAAGAGCCAGAGAAGAA 698636 Query 794439 GATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTT 794498 ||| ||||| || || ||||| | |||| || || |||| || || ||| || Sbjct 698635 GATACCCTCTACAGCAGCAAACGCCACGATGCGTTCACCAAAGGT----AG--ACTCCTT 698582 Query 794499 GT-TG--ATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGAT 794555 || || ||||| | | |||||||| |||||| | | ||| || | ||| Sbjct 698581 GTCTGAAATCCAGGTAAGAGCCCACTCGGCCTTTCGGGCAATAGGACGCATGGTTTGGAT 698522 Query 794556 GGCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGA 794615 || ||||| | | | ||| ||| || | ||| || ||||||||||| || Sbjct 698521 AGCATTGAAGAGCTTGACTCGCTCTGCCGACTCGCGAATGTATGTATCGATGAGGAGTGA 698462 Query 794616 GTAGGTCTCTGAGTGGATGTTTTCGATG 794643 |||| || | ||| ||||||||| || Sbjct 698461 GTAGACTTCGGCGTGAATGTTTTCGCTG 698434 Score = 86.0 bits (94), Expect = 1e-10 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 794019 AGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATG 794078 || || ||||||||||| || || |||||||||||||||||| | ||||||| |||||| Sbjct 698996 AGAAGACGGTCGGCGACAAACTCGATGTACTGGCACATGAGGACATCGTTCATTCCGATG 698937 Query 794079 AGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128 || | || || || | || | | ||||| |||||||| || ||||| Sbjct 698936 AGACCGACAGGGAGGGCCTTTGTAAGGAACTCCTTCTCGATGTCAACGGC 698887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916239060155291