Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03-
01] 69 sequences; 21,721,408 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq18 86.0 5e-12
>seq18
Length=480229
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || |||||||| || | |||||||| || |||||| | ||| ||| || |
Sbjct 341863 ATGCAGATCTTTGTCAAGACGCTGACAGGCAAGACAATTACCTTGGAAGTCGAGTCTTCC 341922
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || | | | || || ||||| || || |||||| | || || ||
Sbjct 341923 GACACCATTGATAATGTCAAGAGCAAGATCCAAGACAAGGAAGGCATCCCACCCGACCAA 341982
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| || | |||| ||| ||||| ||||||||||||| | || | |||| ||||||
Sbjct 341983 CAGCGATTGATTTTTGCTGGTAAGCAGCTGGAGGACGGAAGGACTCTTTCGGATTACAAC 342042
Query 107736 ATTCAAAAGGAGTCTAC 107752
||||| || ||||||||
Sbjct 342043 ATTCAGAAAGAGTCTAC 342059
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398876464569541
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |