Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03- 01] 69 sequences; 21,721,408 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq18 109 4e-19 >seq18 Length=480229 Score = 109 bits (120), Expect = 4e-19 Identities = 165/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| | ||| | || | ||| ||||| |||||| || ||||||||||| || Sbjct 342090 ACCACCTCTAAGACGGAGGACGAGATGGAGAGTAGACTCTTTCTGAATGTTGTAATCCGA 342031 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | | |||| |||| || || || ||||||||||| ||||| || || | || Sbjct 342030 AAGAGTCCTTCCGTCCTCCAGCTGCTTACCAGCAAAAATCAATCGCTGTTGGTCGGGTGG 341971 Query 33642 CACACCTTCTTTGTC-GGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | ||||| ||||| | | || || || |||| || | ||||||| || || Sbjct 341970 GATGCCTTCCTTGTCTTGGATCTTGCTCTT--GACATTATCAATGGTGTCGGAAGACTCG 341913 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | || || || || ||||| | ||| || ||||||||||||||| Sbjct 341912 ACTTCCAAGGTAATTGTCTTGCCTGTCAGCGTCTTGACAAAGATCTGCATA 341862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703723580480