Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03-
01] 69 sequences; 21,721,408 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq18 109 4e-19
>seq18
Length=480229
Score = 109 bits (120), Expect = 4e-19
Identities = 165/231 (71%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||| | ||| | || | ||| ||||| |||||| || ||||||||||| ||
Sbjct 342090 ACCACCTCTAAGACGGAGGACGAGATGGAGAGTAGACTCTTTCTGAATGTTGTAATCCGA 342031
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || | | |||| |||| || || || ||||||||||| ||||| || || | ||
Sbjct 342030 AAGAGTCCTTCCGTCCTCCAGCTGCTTACCAGCAAAAATCAATCGCTGTTGGTCGGGTGG 341971
Query 33642 CACACCTTCTTTGTC-GGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| ||||| ||||| | | || || || |||| || | ||||||| || ||
Sbjct 341970 GATGCCTTCCTTGTCTTGGATCTTGCTCTT--GACATTATCAATGGTGTCGGAAGACTCG 341913
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| || | || || || || ||||| | ||| || |||||||||||||||
Sbjct 341912 ACTTCCAAGGTAATTGTCTTGCCTGTCAGCGTCTTGACAAAGATCTGCATA 341862
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703723580480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |