Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03- 01] 69 sequences; 21,721,408 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq18 87.8 2e-12 >seq18 Length=480229 Score = 87.8 bits (96), Expect = 2e-12 Identities = 152/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 |||| || | ||||| ||| | | | ||||| || ||||||||||| || | ||| Sbjct 341855 CGCAGCCGAAGAACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAATCTGATAGCGTA 341796 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 || |||||||||||| || || | | |||| | |||||||| || || || ||||| Sbjct 341795 CGTCCATCTTCGAGCTGCTTTCCAGCAAAGATCAATCGCTGTTGGTCGGGTGGAATGCCC 341736 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 |||||||| ||| || || | | || | ||||| | | || || || | Sbjct 341735 TCTTTATCTTGAATCTTGGACTTGACGTTGTCAATGGTATCAGAAGATTCTACCTCCAGG 341676 Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | || || |||||||| || |||| ||| |||||||| Sbjct 341675 GTAATTGTCTTGCCAGTCAGGGTCTTTACGAAGATCTGCAT 341635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610788922840