Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03- 01] 69 sequences; 21,721,408 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 2e-13 >seq2 Length=2148610 Score = 95.1 bits (104), Expect = 2e-13 Identities = 186/267 (70%), Gaps = 11/267 (4%) Strand=Plus/Plus Query 1456011 CATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070 || ||||||||| ||| | ||| |||||| ||||| ||||| || ||| | || | Sbjct 698434 CAGCGAAAACATTCACGCCGAAGTCTACTCACTCCTCATCGATACATACATTCGCGAGTC 698493 Query 1456071 GGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGC 1456130 || ||| | | | ||||| || ||| | || ||| | | |||||| Sbjct 698494 GGCAGAGCGAGTCAAGCTCTTCAATGCTATCCAAACCATGCGTCCTATTGCCCGAAAGGC 698553 Query 1456131 CGACTGGGCGATGAAGTGGAT--CA-ACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTC 1456187 ||| ||||| | | ||||| || |||||||| || || ||||| || || || Sbjct 698554 CGAGTGGGCTCTTACCTGGATTTCAGACAAGGAG----TCTAC-CTTTGGTGAACGCATC 698608 Query 1456188 GTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CCATCTTTTG 1456245 || | ||||| || || ||||| ||||| ||||| ||| ||| ||| |||||||||| Sbjct 698609 GTGGCGTTTGCTGCTGTAGAGGGTATCTTCTTCTCTGGCTCTTT-TGCTTCCATCTTTTG 698667 Query 1456246 GCTCAAGAAGCGCGGCCTCATGCCCGG 1456272 ||||||||||||||| |||||||| || Sbjct 698668 GCTCAAGAAGCGCGGTCTCATGCCGGG 698694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177804544823178