Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03-
01] 69 sequences; 21,721,408 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq2 95.1 2e-13
>seq2
Length=2148610
Score = 95.1 bits (104), Expect = 2e-13
Identities = 186/267 (70%), Gaps = 11/267 (4%)
Strand=Plus/Plus
Query 1456011 CATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070
|| ||||||||| ||| | ||| |||||| ||||| ||||| || ||| | || |
Sbjct 698434 CAGCGAAAACATTCACGCCGAAGTCTACTCACTCCTCATCGATACATACATTCGCGAGTC 698493
Query 1456071 GGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGC 1456130
|| ||| | | | ||||| || ||| | || ||| | | ||||||
Sbjct 698494 GGCAGAGCGAGTCAAGCTCTTCAATGCTATCCAAACCATGCGTCCTATTGCCCGAAAGGC 698553
Query 1456131 CGACTGGGCGATGAAGTGGAT--CA-ACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTC 1456187
||| ||||| | | ||||| || |||||||| || || ||||| || || ||
Sbjct 698554 CGAGTGGGCTCTTACCTGGATTTCAGACAAGGAG----TCTAC-CTTTGGTGAACGCATC 698608
Query 1456188 GTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CCATCTTTTG 1456245
|| | ||||| || || ||||| ||||| ||||| ||| ||| ||| ||||||||||
Sbjct 698609 GTGGCGTTTGCTGCTGTAGAGGGTATCTTCTTCTCTGGCTCTTT-TGCTTCCATCTTTTG 698667
Query 1456246 GCTCAAGAAGCGCGGCCTCATGCCCGG 1456272
||||||||||||||| |||||||| ||
Sbjct 698668 GCTCAAGAAGCGCGGTCTCATGCCGGG 698694
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177804544823178
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |