Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03- 01] 69 sequences; 21,721,408 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq18 98.7 9e-16 >seq18 Length=480229 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || |||||||||||||| | | || | |||| |||||||||||||| ||||| Sbjct 342054 CTCTTTCTGAATGTTGTAATCCGAAAGAGTCCTTCCGTCCTCCAGCTGCTTACCAGCAAA 341995 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||| ||||| | || | || |||||||| |||||| ||| | | | Sbjct 341994 AATCAATCGCTGTTGGTCGGGTGGGATGCCTTCCTTGTCTTGGATCTTGCTCTTGACATT 341935 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || || |||| || || || || || |||| || || || Sbjct 341934 ATCAATGGTGTCGGAAGACTCGACTTCCAAGGTAATTGTCTTGCCTGTCAGCGTCTTGAC 341875 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 341874 AAAGATCTGCAT 341863 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| |||||||||||||| | | || || | || || |||||||| || ||||| Sbjct 341826 CTCCTTCTGAATGTTGTAATCTGATAGCGTACGTCCATCTTCGAGCTGCTTTCCAGCAAA 341767 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||| ||||| | |||| || ||| || || ||||| ||| | || Sbjct 341766 GATCAATCGCTGTTGGTCGGGTGGAATGCCCTCTTTATCTTGAATCTTGGACTTGA-CGT 341708 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | || || ||||| ||||||| || || || || || |||| || || | Sbjct 341707 TGTCAATGGTATCAGAAGATTCTACCTCCAGGGTAATTGTCTTGCCAGTCAGGGTCTTTA 341648 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 341647 CGAAGATCTGCAT 341635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793211190520