Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03- 01] 69 sequences; 21,721,408 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq16 120 4e-22 >seq16 Length=487666 Score = 120 bits (132), Expect = 4e-22 Identities = 207/298 (69%), Gaps = 2/298 (1%) Strand=Plus/Minus Query 161348 GTACAAGAGACACCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGTA 161407 ||||| || | || || | |||| ||||| |||||||| || ||||| || || ||| Sbjct 197590 GTACAGGAAATCCCGCAAAGCGAAAAGACACCCTTCTACCCTCGCTCTCCCTACGGTGTA 197531 Query 161408 GCTAAACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCC 161467 || || || || | || ||||| || || || ||| | ||| |||||| |||||||| Sbjct 197530 GCGAAGCTATACGCCTACTGGATAGTCAAAAATTACCGCGAGTCTTATGGTATGCACGCA 197471 Query 161468 AGTAGTGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGA-CTTTCGTAACCCG 161526 || ||| ||||| ||||| || || || ||| || | || |||| | ||||| || || Sbjct 197470 TCTAATGGAATTCTTTTCAATCACGAATCGCCAAGAAGAGG-GAGAACATTCGTCACGCG 197412 Query 161527 TAAGATTACTAGGGGACTATCCCGTATTAGTACAGGACTACAGGATTGTCTATACCTAGG 161586 ||| || || ||| | || || | || | ||||||||||| ||||| || Sbjct 197411 TAAAATAACGCGGGCCGTGGCCGAAATCTCGATGGGTGTTCAGGATTGTCTTTACCTGGG 197352 Query 161587 TAATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGG 161644 || || | | | || || ||||| |||||| ||||||||| || | |||||| Sbjct 197351 GAACCTGGATGCGATGCGTGACTGGGGACATGCTAGAGACTATGTTGAAGGAATGTGG 197294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729928970435720