Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03-
01] 69 sequences; 21,721,408 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq2 122 1e-22
seq5 109 8e-19
>seq2
Length=2148610
Score = 122 bits (134), Expect = 1e-22
Identities = 117/150 (78%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 39613 TAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGT 39672
|||||| || ||||| |||||| || |||||||| || | ||||| ||||| ||
Sbjct 698758 TAAGCAAGCAAAGTCGGTATGTAGACCTTCATCTCTCGAGATGAGCTCGTTGGAAAACGT 698699
Query 39673 GAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAA 39732
| || ||||| ||||| ||||| ||||||||||| |||| ||||||||| ||||| ||
Sbjct 698698 CAAGCCCGGCATGAGACCGCGCTTCTTGAGCCAAAAGATGGAAGCAAAAGAGCCAGAGAA 698639
Query 39733 GAAGATGCCTTCTACTGCTGCAAATGCAAC 39762
|||||| || ||||| || ||||| || ||
Sbjct 698638 GAAGATACCCTCTACAGCAGCAAACGCCAC 698609
>seq5
Length=1549313
Score = 109 bits (120), Expect = 8e-19
Identities = 207/305 (68%), Gaps = 0/305 (0%)
Strand=Plus/Minus
Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576
||||| || ||||| || |||| || ||| || |||| ||||| | | | |
Sbjct 643766 TCGAACTCCTCTCCATGCACTTCATGCATTCCGGGCGCTTCAGCGGGACAGAAAAGAGGC 643707
Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAG 69636
|| || | | | || |||||| ||| || | || |||||||||||||| | ||
Sbjct 643706 CAGTCACCGTTCTGCTCGACTCGTCGCATGAACATGTCTGGAATCCAAAGAGCAAAGAAA 643647
Query 69637 AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATA 69696
|| ||||| | ||| |||||| ||||| ||| || ||||| || || || |
Sbjct 643646 AGGTCTCTAGCTCTGACTTCTTCTTTTCCGTGATTCTTGCGGAGATCAAGGAAGTCAAAG 643587
Query 69697 ATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCC 69756
||||| | ||||||||| || | || || || | | | || ||||| || || || |||
Sbjct 643586 ATATCTGCATGCCATGGCTCGATGTAGATAGCAAAGGCACCAGGTCGCTTGTTGCCACCC 643527
Query 69757 TGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGAT 69816
||||| | || | ||||| || || | |||| ||||||||| | |||||||| ||
Sbjct 643526 TGATCAACATAACGCGCAGTATTGTTGAAAACTCGCAGCATCGGTACGATACCATTGGAG 643467
Query 69817 TTACC 69821
| |||
Sbjct 643466 TAACC 643462
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908207541160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |