Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03-
01] 69 sequences; 21,721,408 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq2 116 3e-21
>seq2
Length=2148610
Score = 116 bits (128), Expect = 3e-21
Identities = 154/212 (73%), Gaps = 9/212 (4%)
Strand=Plus/Plus
Query 44078 AAAGCAGACTGGGCCCTTAAATGGATAAATTCA---AATGATTCT---TTTGGAGAACGA 44131
|| || || ||||| |||| ||||| |||| || || ||| ||||| |||||
Sbjct 698549 AAGGCCGAGTGGGCTCTTACCTGGAT---TTCAGACAAGGAGTCTACCTTTGGTGAACGC 698605
Query 44132 CTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTT 44191
| || |||||||| | ||| || || || ||||| || || || ||||| |||| |||
Sbjct 698606 ATCGTGGCGTTTGCTGCTGTAGAGGGTATCTTCTTCTCTGGCTCTTTTGCTTCCATCTTT 698665
Query 44192 TGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGT 44251
||| | ||||| || ||| | ||||| || ||||||||||| || ||| | || |
Sbjct 698666 TGGCTCAAGAAGCGCGGTCTCATGCCGGGCTTGACGTTTTCCAACGAGCTCATCTCGAGA 698725
Query 44252 GATGAAGGCTTACATTGCGATTTTGCTTGCTT 44283
|||||||| ||||| ||| |||||||||||
Sbjct 698726 GATGAAGGTCTACATACCGACTTTGCTTGCTT 698757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455665764345
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |