Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03- 01] 69 sequences; 21,721,408 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq2 116 3e-21 >seq2 Length=2148610 Score = 116 bits (128), Expect = 3e-21 Identities = 154/212 (73%), Gaps = 9/212 (4%) Strand=Plus/Plus Query 44078 AAAGCAGACTGGGCCCTTAAATGGATAAATTCA---AATGATTCT---TTTGGAGAACGA 44131 || || || ||||| |||| ||||| |||| || || ||| ||||| ||||| Sbjct 698549 AAGGCCGAGTGGGCTCTTACCTGGAT---TTCAGACAAGGAGTCTACCTTTGGTGAACGC 698605 Query 44132 CTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTT 44191 | || |||||||| | ||| || || || ||||| || || || ||||| |||| ||| Sbjct 698606 ATCGTGGCGTTTGCTGCTGTAGAGGGTATCTTCTTCTCTGGCTCTTTTGCTTCCATCTTT 698665 Query 44192 TGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGT 44251 ||| | ||||| || ||| | ||||| || ||||||||||| || ||| | || | Sbjct 698666 TGGCTCAAGAAGCGCGGTCTCATGCCGGGCTTGACGTTTTCCAACGAGCTCATCTCGAGA 698725 Query 44252 GATGAAGGCTTACATTGCGATTTTGCTTGCTT 44283 |||||||| ||||| ||| ||||||||||| Sbjct 698726 GATGAAGGTCTACATACCGACTTTGCTTGCTT 698757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455665764345