Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03- 01] 69 sequences; 21,721,408 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq16 104 3e-17 seq2 102 1e-16 >seq16 Length=487666 Score = 104 bits (114), Expect = 3e-17 Identities = 219/327 (67%), Gaps = 0/327 (0%) Strand=Plus/Minus Query 7241 CAAGCCTCAACTTCGGAGATGTTTGGTAAAGTCCGAGAAACTCCACAAAACGAGGAGACA 7300 || || ||||| || ||| ||| || ||||| | |||| || |||| ||| ||||| Sbjct 197620 CAGGCTTCAACATCCGAGCTGTACGGCAAAGTACAGGAAATCCCGCAAAGCGAAAAGACA 197561 Query 7301 CCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGGCTCGTCAAA 7360 ||||||||||| ||||| |||||| || | ||| | || | ||| | |||||| Sbjct 197560 CCCTTCTACCCTCGCTCTCCCTACGGTGTAGCGAAGCTATACGCCTACTGGATAGTCAAA 197501 Query 7361 AATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAACCATGAATCA 7420 ||||||||||||||||| || || || | ||||| || ||||| || ||||| Sbjct 197500 AATTACCGCGAGTCTTATGGTATGCACGCATCTAATGGAATTCTTTTCAATCACGAATCG 197441 Query 7421 CCGAGACGAGGTGCAGACTTTGTCACAAAGAAGATTACCGAGGGTATCAAACAAATCATG 7480 || ||| |||| | || ||||| || || || || | ||||| | Sbjct 197440 CCAAGAAGAGGGAGAACATTCGTCACGCGTAAAATAACGCGGGCCGTGGCCGAAATCTCG 197381 Query 7481 AAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGCGAGAGATTGGGGTCAC 7540 | ||||| |||| | || | |||| ||| | | ||| | | || ||||| || Sbjct 197380 ATGGGTGTTCAGGATTGTCTTTACCTGGGGAACCTGGATGCGATGCGTGACTGGGGACAT 197321 Query 7541 GCGAAGGACTATGTTGAAGCTATGTGG 7567 || | ||||||||||||| |||||| Sbjct 197320 GCTAGAGACTATGTTGAAGGAATGTGG 197294 >seq2 Length=2148610 Score = 102 bits (112), Expect = 1e-16 Identities = 143/195 (73%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 94753 AAAGCGGATTGGGCTATGAAGTGG-TTTGATACAA--AGTCGCGTTCCTTTGCTGAGCGA 94809 || || || |||||| | | ||| ||| | |||| |||| | |||||| ||| || Sbjct 698549 AAGGCCGAGTGGGCTCTTACCTGGATTTCAGACAAGGAGTC---TACCTTTGGTGAACGC 698605 Query 94810 CTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTA 94868 || | || ||||| ||| |||||||||||||||||||| | ||| ||| | || | Sbjct 698606 ATCGTGGCGTTTGCTGCTGTAGAGGGTATCTTCTTCTCTGGCT-CTTTTGCTTCCATCTT 698664 Query 94869 TTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCG 94928 ||||||||||||||| ||||||||||| || | || ||||||||||| ||||| | Sbjct 698665 TTGGCTCAAGAAGCGCGGTCTCATGCCGGGCTTGACGTTTTCCAACGAGCTCATCTCGAG 698724 Query 94929 TGACGAGGGACTCCA 94943 || || || || || Sbjct 698725 AGATGAAGGTCTACA 698739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260296937560