Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03-
01] 69 sequences; 21,721,408 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq7 257 5e-63
seq18 165 2e-35
seq17 91.5 4e-13
>seq7
Length=1189413
Score = 257 bits (284), Expect = 5e-63
Identities = 678/1029 (66%), Gaps = 11/1029 (1%)
Strand=Plus/Minus
Query 349619 ACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATT 349678
||||| || ||||| || || || | |||||| || || || ||||| || | ||||
Sbjct 283938 ACTGTCCCCGCCTACTTCAACGACTCTCAGCGTCAAGCCACCAAGGATGCCGGTACCATT 283879
Query 349679 GCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGG 349738
|| || | | || || |||| || || || |||||||| || || || || || ||
Sbjct 283878 GCTGGTCTCCAGGTCCTCCGAATCATCAACGAGCCCACTGCCGCTGCCATCGCTTACGGT 283819
Query 349739 CTTGATAAAATGAGTGA---CCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGT 349795
|| || || | | | || | || || || | || ||||| ||| | |||||||||
Sbjct 283818 CTAGACAAGAAGGGCGAGTCCGGCGAGAAGAACGTCCTCATTTTCGATCTCGGTGGTGGT 283759
Query 349796 ACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCT 349855
|| || ||||| || || || || |||||||||| || || ||||| || || || |||
Sbjct 283758 ACATTCGATGTCTCCCTCCTGACCATTGAAGAGGGTATCTTCGAAGTCAAGGCTACCGCT 283699
Query 349856 GGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAA 349915
||||| || ||||| ||||| |||||||| || || ||||||||| | |||| | ||
Sbjct 283698 GGTGACACCCATCTCGGTGGTGAAGATTTCGACAACCGTCTCGTTACCTTCTTTGCTCAA 283639
Query 349916 GAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTA 349975
||||| ||||| | || | ||||| | ||| | | || | | || |||
Sbjct 283638 GAATTCAAGCGAAAGAACAAGAAGGATATCTCCGGAAATGCCCGTGCTCTCAGACGTCTA 283579
Query 349976 AGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAA 350035
||||| || || || ||||| ||| | | |||| ||| || | || ||| | ||||||
Sbjct 283578 AGAACAGCATGCGAGCGTGCGAAGAGAACTCTATCCTCTGCTGCACAGACCACCATTGAA 283519
Query 350036 ATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAA 350095
||||| || || || || | || |||| |||| || || |||||||| || ||
Sbjct 283518 ATTGACTCGCTCTTCGAGGGTATCGACTTCTACACATCCATCACCCGTGCTCGATTCGAG 283459
Query 350096 GAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGAT 350155
||| | || ||||| || ||| | |||||||| || || || || || | ||
Sbjct 283458 GAACTGTGCCAAGATCTCTTCAGATCCACAATGGACCCAGTCGAGAAGGTTCTCCGTGAC 283399
Query 350156 GCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATT 350215
| || || ||| | | | || | || | || |||||||| || |||||
Sbjct 283398 TCGAAGATTGACAAGTCTACTGTCAACGAGATTGTCCTCGTCGGTGGTTCCACTCGTATC 283339
Query 350216 CCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATT 350275
|||| | | ||| || | | || || | || || || || || || | | || ||
Sbjct 283338 CCAAGAATCCAAAAGCTCGTTTCCGACTACTTCAACGGAAAGGAGCCATGCAAGTCCATC 283279
Query 350276 AATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAAT 350335
|| || ||||| || || ||||| || || ||||| || || | ||| | |||| |
Sbjct 283278 AACCCCGATGAGGCCGTCGCATACGGCGCCGCTGTCCAAGCTGCCATTCTCACTGGTGAC 283219
Query 350336 AAGAGTTCTAAA--ATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGAT 350393
| | | ||| | | ||||| | || || ||||| |||| || || || ||
Sbjct 283218 A--CATCCGAAAAGACCCAAGATCTCCTCCTCCTCGATGTCGCTCCTCTATCCCTCGGTA 283161
Query 350394 TAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAA 350453
| || ||| | |||| || | ||| ||| || ||||| | || || ||||| |
Sbjct 283160 TTGAGACTGCCGGTGGTGTTTTCACTCCTCTCATCAAGAGAAACACAACAGTTCCTACCA 283101
Query 350454 AAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTAT 350513
| ||||| ||| || || |||| || || || || || | ||| |||||||| |
Sbjct 283100 AGAAGTCTGAAATCTTCTCCACATACGCCGACAACCAACCTGGTGTATTGATTCAAGTCT 283041
Query 350514 TTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTT--ACCCTAAG 350571
| || |||||||||||| | || || || || || || || ||| || | | | |
Sbjct 283040 TCGAGGGTGAACGTGCTAGAACAAAGGACAACAACCTCCTCGG-GAAGTTCGAACTTTCG 282982
Query 350572 TGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTC 350631
| || ||||| || ||||| |||||||| || || || | |||||| | ||| |
Sbjct 282981 -GGTATCCCACCTGCACCAAGAGGTGTTCCTCAAATCGAGGTTACCTTCGATGTCGATGC 282923
Query 350632 AAATGGTAT 350640
|| || ||
Sbjct 282922 CAACGGAAT 282914
Score = 152 bits (168), Expect = 2e-31
Identities = 414/631 (66%), Gaps = 6/631 (1%)
Strand=Plus/Plus
Query 183164 GGCAGTTTCTAATCCTAATGATAATGGTGCTACATCTAGTAATAATAAATCTGATGTTTT 183223
|||||| || | || | |||| || || ||||| || | | | |||| || ||
Sbjct 283150 GGCAGTCTCAATACCGAGGGATAGAGGAGCGACATCGAGGAGGAGGAGATCTTGGGTCTT 283209
Query 183224 ATCTGATTTAATATCACTTAAAATTGCAGCTTGAACAGCTGCACCATATGCAACAGCTTC 183283
|| ||| | | || | | ||| |||||||| ||||| || || ||||| || || ||
Sbjct 283210 TTCGGATGTGTCACCAGTGAGAATGGCAGCTTGGACAGCGGCGCCGTATGCGACGGCCTC 283269
Query 183284 ATCTGGGTTAATTGAACGAGATAATTCTTTGCCATTAAAAAATTCTGAAAGCATTTGTTG 183343
||| ||||| || || || || || || || || | || |||| | | |||
Sbjct 283270 ATCGGGGTTGATGGACTTGCATGGCTCCTTTCCGTTGAAGTAGTCGGAAACGAGCTTTTG 283329
Query 183344 AATTTTTGGAATTCTAGTTGAACCACCGACTAATACTACTTCATCGATATTACTTTTACT 183403
||| |||| || | ||| ||||||||||| | || | || | || | || ||
Sbjct 283330 GATTCTTGGGATACGAGTGGAACCACCGACGAGGACAATCTCGTTGACAGTAGACTTGTC 283389
Query 183404 AATTTGTGAATCTTTTAAAACTTTTTCAACAGGGTCCATAGTTTTTCTAAATAAATCTAT 183463
||| | || || | ||| || || || |||||||| || ||| || | ||||
Sbjct 283390 AATCTTCGAGTCACGGAGAACCTTCTCGACTGGGTCCATTGTGGATCTGAAGAGATCTTG 283449
Query 183464 ACATAACTCTTCTAATCTTGCTCTAGTTAAAGATGaaaaaaaGTCAATACCATTATATAA 183523
|| | || || |||| || | || | |||| | ||||| ||||| | | |
Sbjct 283450 GCACAGTTCCTCGAATCGAGCACGGGTGATGGATGTGTAGAAGTCGATACCCTCGAAGAG 283509
Query 183524 GGAATCAATTTCAATCGATGTTTGTGTAGATGATGATAATGTTCTTTTAGCTCGTTCACA 183583
|| ||||||||||| | || |||| || || |||| ||||| || || || || ||
Sbjct 283510 CGAGTCAATTTCAATGGTGGTCTGTGCAGCAGAGGATAGAGTTCTCTTCGCACGCTCGCA 283569
Query 183584 TGCTGTTCTTAGTCGACGTAATGATCTTGGATTATCTGTAATATCTTGTTTATGTTTTCT 183643
|||||||||||| || | | | | | ||| | | ||||| | || | ||||
Sbjct 283570 TGCTGTTCTTAGACGTCTGAGAGCACGGGCATTTCCGGAGATATCCTTCTTGTTCTTTCG 283629
Query 183644 TTTAAATTC---AGTAATAAAATGTTGAAGTAATCTTGTATCAAAATCTTCACCACCTAA 183700
|| ||||| || || | || || || | | | || |||||||||||||| |
Sbjct 283630 CTTGAATTCTTGAGCAA-AGAAGGT--AACGAGACGGTTGTCGAAATCTTCACCACCGAG 283686
Query 183701 ATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTTCAATATTTAAAATTGA 183760
||| || || ||||| ||||| || ||||| || || || |||||||| | | | ||
Sbjct 283687 ATGGGTGTCACCAGCGGTAGCCTTGACTTCGAAGATACCCTCTTCAATGGTCAGGAGGGA 283746
Query 183761 TACATCAAATGTACCACCACCCAAATCAAAA 183791
||||| |||||||||||||| | ||| |||
Sbjct 283747 GACATCGAATGTACCACCACCGAGATCGAAA 283777
Score = 120 bits (132), Expect = 9e-22
Identities = 146/199 (73%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 349209 TCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAA 349268
||||| ||||||| || || ||||| || | ||| ||||||||||| ||||| || || |
Sbjct 284415 TCGATCTAGGTACCACCTACTCTTGCGTCGGTGTCTGGCAAAATGACCGTGTCGAGATCA 284356
Query 349269 TTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGC 349328
| || || || || || ||||||||||| || ||||| || | || || || || ||||
Sbjct 284355 TCGCCAACGACCAGGGAAACAGAACAACTCCTTCATATGTCGGCTTCACAGACACGGAGC 284296
Query 349329 GTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTG 349388
| | ||||||||| | || || || || | || || ||| | || || || || |
Sbjct 284295 GACTCATTGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCACACAACACCGTCTTCG 284236
Query 349389 ATGCTAAGCGACTTATTGG 349407
|||| ||||| ||||| ||
Sbjct 284235 ATGCCAAGCGTCTTATCGG 284217
>seq18
Length=480229
Score = 165 bits (182), Expect = 2e-35
Identities = 175/231 (76%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||||||||| || | | ||||| ||||| || || ||||| || ||||| || |||||
Sbjct 341865 CATACCACCTCGCAGCCGAAGAACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAATC 341806
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|||| || || |||||||| || || |||||||||||||| | || || || || ||
Sbjct 341805 TGATAGCGTACGTCCATCTTCGAGCTGCTTTCCAGCAAAGATCAATCGCTGTTGGTCGGG 341746
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||||| || |||||||| ||||| || | || || || ||||| | |||||| | |||
Sbjct 341745 TGGAATGCCCTCTTTATCTTGAATCTTGGACTTGACGTTGTCAATGGTATCAGAAGATTC 341686
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || |||| |||||| || || || || ||||| || ||||||||
Sbjct 341685 TACCTCCAGGGTAATTGTCTTGCCAGTCAGGGTCTTTACGAAGATCTGCAT 341635
Score = 150 bits (166), Expect = 5e-31
Identities = 174/232 (75%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||||| || ||||| |||||||| || || || || || || ||||| ||
Sbjct 341637 CATACCACCACGTAGTCGGAGAACCAGATGAAGGGTGGATTCCTTCTGGATGTTATAGTC 341578
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | ||||| ||||| || | ||| || || || ||||| |||||||| || || ||
Sbjct 341577 TGAGAGGGTTCGTCCATCCTCTAATTGCTTCCCGGCGAAGATAAGACGTTGTTGGTCGGG 341518
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTT-ACATTATCAATCGAATCAGATGGTT 140685
||||| || || || ||||| || || ||| || || || || || | |||||||| |
Sbjct 341517 CGGAATGCCCTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATGGTATCAGATGACT 341459
Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
| || ||||| || | ||||||||||| | || || || || ||||||||
Sbjct 341458 CCACCTCAAGAGTGATGGTCTTTCCGGTCAAGGTCTTCACGAAGATCTGCAT 341407
Score = 120 bits (132), Expect = 9e-22
Identities = 156/213 (73%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
|| || ||||| |||||||||||||| ||||| || ||||| || | || | || ||
Sbjct 342074 AGGACGAGATGGAGAGTAGACTCTTTCTGAATGTTGTAATCCGAAAGAGTCCTTCCGTCC 342015
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| || || || |||||||| || | || || || || || || || ||||| || ||
Sbjct 342014 TCCAGCTGCTTACCAGCAAAAATCAATCGCTGTTGGTCGGGTGGGATGCCTTCCTTGTCT 341955
Query 140646 TGAATTTTAGCTTTT-ACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGT 140704
|| || || ||| || ||||||||||| | || || | || ||||| | |||| |||
Sbjct 341954 TGGATCTT-GCTCTTGACATTATCAATGGTGTCGGAAGACTCGACTTCCAAGGTAATTGT 341896
Query 140705 CTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||| || || || || || ||||| ||||||||
Sbjct 341895 CTTGCCTGTCAGCGTCTTGACAAAGATCTGCAT 341863
>seq17
Length=484702
Score = 91.5 bits (100), Expect = 4e-13
Identities = 154/222 (69%), Gaps = 7/222 (3%)
Strand=Plus/Plus
Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734
|||||| || | |||||||| | || | || || || || ||||| ||||| || ||
Sbjct 465610 CATTGCTGGTCTCAATGTTCTCCGTATCGTCAACGAGCCTACCGCTGCCGCAATCGCCTA 465669
Query 349735 TGGGCTTGATAAAATGAGT--GACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792
|| || ||| ||| | || ||||| | || | | | ||| ||||||||
Sbjct 465670 CGGTCT-----AAACCAGTCCGGCCCTGAAAAGCAAATCATCGTCTACGATCTAGGTGGT 465724
Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852
||||||||||||||||| || ||| | | ||||| || | || || || |||||
Sbjct 465725 GGTACTTTTGATGTATCTCTTCTATCCGTCGAAGATGGTGTATTCGAGGTCCTTGCAACA 465784
Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGT 349894
|| || || |||||||| || ||||| || ||||| || |||
Sbjct 465785 GCAGGAGACACACATCTCGGAGGAGAGGACTTTGACAACCGT 465826
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515253060420407
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