Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03- 01] 69 sequences; 21,721,408 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 5e-15 >seq2 Length=2148610 Score = 96.9 bits (106), Expect = 5e-15 Identities = 171/249 (69%), Gaps = 3/249 (1%) Strand=Plus/Minus Query 46626 TAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGT 46685 ||| || ||||| || ||| || ||||||||||| || | ||||| ||||| || Sbjct 698758 TAAGCAAGCAAAGTCGGTATGTAGACCTTCATCTCTCGAGATGAGCTCGTTGGAAAACGT 698699 Query 46686 GAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAA 46745 | || ||||| || || ||||| ||||||||||| || | || ||||| ||||| || Sbjct 698698 CAAGCCCGGCATGAGACCGCGCTTCTTGAGCCAAAAGATGGAAGCAAAAGAGCCAGAGAA 698639 Query 46746 GAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT- 46804 ||| || || |||||||| || || || || | | || || | | | || || | Sbjct 698638 GAAGATACCCTCTACAGCAGCAAACGCCACGATGCGTTCACCAAAGGTAGACTCCTTGTC 698579 Query 46805 --GAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGC 46862 |||||| | ||||||| || |||||| | | | |||| |||| ||||| Sbjct 698578 TGAAATCCAGGTAAGAGCCCACTCGGCCTTTCGGGCAATAGGACGCATGGTTTGGATAGC 698519 Query 46863 ATTAAAGAG 46871 ||| ||||| Sbjct 698518 ATTGAAGAG 698510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933785094080