Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03- 01] 69 sequences; 21,721,408 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq18 123 6e-23 >seq18 Length=480229 Score = 123 bits (136), Expect = 6e-23 Identities = 160/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || || | |||||| ||||| |||||||||||||| || ||||||||||| | | ||| Sbjct 342083 CTAAGACGGAGGACGAGATGGAGAGTAGACTCTTTCTGAATGTTGTAATCCGAAAGAGTC 342024 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || || || || || || || || || || | | ||| ||||| | | ||| ||| Sbjct 342023 CTTCCGTCCTCCAGCTGCTTACCAGCAAAAATCAATCGCTGTTGGTCGGGTGGGATGCCT 341964 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| ||||| || || |||||| | || | | |||| ||| ||| ||||| | Sbjct 341963 TCCTTGTCTTGGATCTTGCTCTTGACATTATCAATGGTGTCGGAAGACTCGACTTCCAAG 341904 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || ||||| || || ||||| || |||| |||||| Sbjct 341903 GTAATTGTCTTGCCTGTCAGCGTCTTGACAAAGATCTGCAT 341863 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||| ||| || |||||||| || || || || |||||||| || || | | |||| Sbjct 341624 AGTCGGAGAACCAGATGAAGGGTGGATTCCTTCTGGATGTTATAGTCTGAGAGGGTTCGT 341565 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 ||||| |||| ||||||||||||||||| | || ||||| | || || || ||| Sbjct 341564 CCATCCTCTAATTGCTTCCCGGCGAAGATAAGACGTTGTTGGTCGGGCGGAATGCCCTCC 341505 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || || || ||||| | || | | | || || ||| || |||||||| Sbjct 341504 TTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTATCAGATGACTCCACCTCAAGAGTG 341445 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || | ||||||||||||| |||||| Sbjct 341444 ATGGTCTTTCCGGTCAAGGTCTTCACGAAGATCTGCAT 341407 Score = 102 bits (112), Expect = 2e-16 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || ||||| || || ||||| || || ||||||||||| | || || | |||||| Sbjct 341846 AGAACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAATCTGATAGCGTACGTCCATCT 341787 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| || || ||||| | | ||| ||||| | | || || || || | Sbjct 341786 TCGAGCTGCTTT--CCAGCAAAGATCAATCGCTGTTGGTCGGGTGGAATGCCCTCTTTAT 341729 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 ||||||| || ||||| | || | | | || ||| ||||| || || ||||| | Sbjct 341728 CTTGAATCTTGGACTTGACGTTGTCAATGGTATCAGAAGATTCTACCTCCAGGGTAATTG 341669 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| || || ||||| ||||||| |||||| Sbjct 341668 TCTTGCCAGTCAGGGTCTTTACGAAGATCTGCAT 341635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153819779950299