Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq3 102 7e-17 seq14 91.5 1e-13 >seq3 Length=1694370 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || || | ||||||| || | ||||| ||||| || || || || |||| Sbjct 423494 TTCCACCACGGAGACGAAGCACCAGGTGAAGGGTGGATTCCTTCTGGATATTGTAATCCG 423553 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 |||||| || ||||||| ||||| ||||| || | || || ||||||||||| | Sbjct 423554 ACAGGGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAG 423613 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||| |||||||| |||||| ||| || | | ||| || || || ||| Sbjct 423614 GGATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCGATCGTGTCCGAGGACTCGA 423673 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || ||||||||||| || | || ||||| || || ||||| Sbjct 423674 CCTCGAGTGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 423722 Score = 96.9 bits (106), Expect = 3e-15 Identities = 168/243 (69%), Gaps = 1/243 (0%) Strand=Plus/Plus Query 20934 TTCCTGAGCCC-GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTG 20992 |||||| || | ||| || || || || | |||||||| || | || |||||||| || Sbjct 422971 TTCCTGCGCTCAGTTGCCGCCACGGAGACGGAGCACCAGGTGAAGCGTCGACTCCTTCTG 423030 Query 20993 AATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCT 21052 || || ||||| | || || | ||||||| ||||| ||||| ||| | || || | Sbjct 423031 GATATTGTAGTCAGAAAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGCCG 423090 Query 21053 CTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGT 21112 |||||||| || | |||||||||||| ||| ||| || || | | ||| || Sbjct 423091 TTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATTTTTGCCTTGACGTTGTCGATGGT 423150 Query 21113 ATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTG 21172 || | ||| || | ||| ||||||||||| || | || |||||||| || || Sbjct 423151 GTCCGATGACTCGACCTCGAGGGTGATGGTCTTGCCTGTCAGAGTCTTGACAAAGATCTG 423210 Query 21173 CAT 21175 ||| Sbjct 423211 CAT 423213 >seq14 Length=1069518 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 20973 TGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGT 21032 |||| ||||||||||| || ||||| ||||| ||| || || | ||||| ||||| Sbjct 1024177 TGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGC 1024118 Query 21033 TTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTT 21092 ||||| || | ||||| | ||||||||| || | || |||||||| |||||| Sbjct 1024117 TTGCCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTC 1024058 Query 21093 TGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTT 21152 ||||| | | ||| || || | || ||| ||| | || || |||||||| || Sbjct 1024057 GCCTTCACATTGTCGATGGTGTCGCTGGACTCGACTTCGAGAGTGATCGTCTTGCCAGTC 1023998 Query 21153 AACGTTTTGACAAATATTTGCAT 21175 || || || || || || ||||| Sbjct 1023997 AAAGTCTTCACGAAAATCTGCAT 1023975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422258690517884