Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1 174 2e-38 seq14 152 5e-32 seq3 140 3e-28 seq7 93.3 4e-14 seq5 91.5 2e-13 >seq1 Length=2114445 Score = 174 bits (192), Expect = 2e-38 Identities = 183/235 (78%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| ||||| || |||||||| | |||||| |||||||| Sbjct 847037 ATCTGGCAGATGTACAAGAAGGCAGAGGCATCCTTCTGGACAGCAGAGGAGATGGACCTG 847096 Query 116696 TCCAAGGA-CACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAA 116751 |||||||| | | | |||||| | || ||||| | |||||||| ||||||||| Sbjct 847097 TCCAAGGATCTCCAT-GACTGGCAAAACCGTCTGAACAATAACGAGCGTCATTTCATCTC 847155 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGC- 116810 ||||| || || || ||||| || |||||||||||||||||||||||| || |||| Sbjct 847156 CCACGTCCTTGCTTTCTTCGCTGCTTCCGACGGCATCGTCAACGAGAATCTCGTTGAGCG 847215 Query 116811 GTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGAT 116865 |||| || | |||||||||| || ||||| || ||||||||||| || || || Sbjct 847216 GTTTAGC-AATGAGGTGCAGGCTGCTGAGGCCCGATGCTTCTACGGTTTCCAAAT 847269 Score = 167 bits (184), Expect = 2e-36 Identities = 332/481 (69%), Gaps = 8/481 (2%) Strand=Plus/Plus Query 116954 GCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCC 117013 ||||| || || || || ||| | || |||||||| ||||| || |||||| | Sbjct 847408 GCCATTGATACCATTCCATGCATTAAGCGCAAGGCCGACTGGGCATTGAAATGGATCTCG 847467 Query 117014 GGCAGAGAGGCCG-CCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTT 117072 | || || | || |||| | || || || || |||||||| || || |||||| |||| Sbjct 847468 GACA-AGCGTTCGACCTTTGCTGAACGTCTCGTCGCCTTCGCCGCTGTGGAGGGCATCTT 847526 Query 117073 CTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCT 117132 ||| || ||| ||||| ||||| || ||| | ||||| ||||| ||||||||||| || Sbjct 847527 CTTCTCCGGCTCCTTCGCTGCCATCTTCTGGATGAAGAAGCGCGGTCTCATGCCCGGTCT 847586 Query 117133 GACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTT 117192 ||| ||| |||||||||||||||| | || ||||| |||| ||||||||| || | Sbjct 847587 GACATTCTCCAACGAGCTCATCTCCCGCGATGAGGGCATGCACACCGACTTTGCATGCCT 847646 Query 117193 GCTGTTCAAGCATTTGGTGCAGCGACC-GAGCGCGGCGCGCGTCAGGGAGATCGTCACCG 117251 || |||| || | | ||| || | | || | | |||| | | ||| | || | Sbjct 847647 ACTCTTCAGCCACCTCCGCCGGCGCCCACATCCCGACAC-CGTCCGCAAAATCATTACTG 847705 Query 117252 ACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGT-GCGTCTGCTGGGA 117310 | ||||| ||||| || |||||||| || || || || || ||| || | || Sbjct 847706 AGGCGGTACTGATCGAACAAACTTTCCTCACGGATGCCCTTCCTGTCGCG-CTCATCGGC 847764 Query 117311 CTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGA 117369 | || | |||| | ||| || ||||| |||||||||||||| | || || ||| Sbjct 847765 ATGAACT-CGAACCTAATGAACCAGTACATAGAGTTCGTCGCCGATCGCCTTCTTGTCGC 847823 Query 117370 GCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGCTGGACTTTATGAACCTCATCTC 117429 || | | || ||| ||| ||| | ||||| | ||||| ||| |||||||||| Sbjct 847824 TCTCGGCAACGAGAAGGTCTATAACGTCACGAACCCCTTCGACTTCATGGACCTCATCTC 847883 Query 117430 C 117430 | Sbjct 847884 C 847884 >seq14 Length=1069518 Score = 152 bits (168), Expect = 5e-32 Identities = 165/216 (76%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || ||| | ||||| || |||||||| |||| |||||| | | Sbjct 1023747 ATGCAAATCTTCGTCAAGACGTTGACGGGAAAGACCATCACGCTCGAAGTCGAATCGTCG 1023806 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| |||||| || |||| ||||| ||||||||||| | || || Sbjct 1023807 GATACCATTGATAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCTCCCGATCA 1023865 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| ||||| ||||| || |||| |||||||| ||||||||| Sbjct 1023866 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTTTCCGACTACAA 1023925 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||| | || || ||||| ||| |||| Sbjct 1023926 TATCCAGAAGGAGTCTACCCTTCATCTCGTGCTGCG 1023961 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || ||||| || ||||| |||| ||||| ||| | Sbjct 1023975 ATGCAGATTTTCGTGAAGACTTTGACTGGCAAGACGATCACTCTCGAAGTCGAGTCCAGC 1024034 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | |||| || || | ||||| ||||| ||||| | |||||| Sbjct 1024035 GACACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAG 1024094 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| ||||| || || | ||||| || | |||||||||| Sbjct 1024095 CAGCGTCTTATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTACAAC 1024154 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| |||||||||| || || Sbjct 1024155 ATCCAGAAGGAGTCCACGCTGCACCTTGT 1024183 Score = 125 bits (138), Expect = 7e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| |||||||| |||| || || | | Sbjct 1023519 ATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACACTCGAGGTTGAGTCATCG 1023578 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || || | || || |||||||| ||| | || || Sbjct 1023579 GACACTATCGATAACG-TCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCTGATCA 1023637 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| |||||||| |||| ||||| ||| |||||||| Sbjct 1023638 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAAGACGGTCGCACACTCTCGGACTACAA 1023697 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||| ||||||||| | ||||| || || ||| Sbjct 1023698 CATTCAGAAGGAGTCAACGCTTCACCTTGTG 1023728 Score = 122 bits (134), Expect = 9e-23 Identities = 151/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| || ||||| | || ||||| | | | Sbjct 1023291 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACGATCACTCTTGAGGTCGAGTCGAGC 1023350 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || |||| ||||| ||||| || || | ||||| Sbjct 1023351 GACACTATCGATAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCA 1023409 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| || || ||||| || || | ||||||||| ||||||||| Sbjct 1023410 GCAGCGCCTTATCTTCGCTGGGAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAA 1023469 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| |||| || || Sbjct 1023470 CATCCAGAAGGAATCCACCCTTCA 1023493 Score = 87.8 bits (96), Expect = 2e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 40793 GCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCA 40852 |||| ||| | |||||||| || || |||| ||| ||||||||||| || || | |||| Sbjct 1023166 GCATTCCCCCCGACCAGCAGCGCCTGATCTTCGCTGGCAAACAGCTTGAGGATGGCCGCA 1023225 Query 40853 CCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||| || |||||||||||||||||| | ||||| || || || Sbjct 1023226 CCCTGTCGGATTACAACATCCAGAAGGAGTCGACGCTCCACCTCGT 1023271 >seq3 Length=1694370 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| ||||||||| |||| ||||| | | Sbjct 423213 ATGCAGATCTTTGTCAAGACTCTGACAGGCAAGACCATCACCCTCGAGGTCGAGTCATCG 423154 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| |||||| | ||||| || |||||||| | ||||| Sbjct 423153 GACACCATCGACAACG-TCAAGGCAAAAATCCAGGACAAGGAAGGCATCCCTCCCGACCA 423095 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| || |||| || ||||| ||||| || |||| ||||| || |||||||| Sbjct 423094 GCAACGGCTGATCTTTGCTGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCTGACTACAA 423035 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| | ||||| || || ||| | || | | |||||| Sbjct 423034 TATCCAGAAGGAGTCGACGCTTCACCTGGTGCTCCGTCTCCGTGGCGGC 422986 Score = 122 bits (134), Expect = 9e-23 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| |||||||| |||| ||||| || | Sbjct 423722 ATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACACTCGAGGTCGAGTCCTCG 423663 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||| | || || | ||||| ||||||||||| | ||||| Sbjct 423662 GACACGATCGACAACG-TCAAAGCCAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCA 423604 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| ||| ||||| ||||| || |||| || ||||| || ||||| Sbjct 423603 GCAGAGGCTGATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGTACCCTGTCGGATTACAA 423544 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||| |||| || || || ||| Sbjct 423543 TATCCAGAAGGAATCCACCCTTCACCTGGTG 423513 >seq7 Length=1357966 Score = 93.3 bits (102), Expect = 4e-14 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 40793 GCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCA 40852 ||||||| | ||||||||||| || |||| ||| ||||| ||||| || |||| |||| Sbjct 1033325 GCATCCCGCCCGACCAGCAACGCCTGATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGCA 1033384 Query 40853 CCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 | ||| ||||||||||||||| ||||| |||| || || || || Sbjct 1033385 CACTCTCCGACTACAACATCCAAAAGGAATCCACCCTCCACCTCGT 1033430 >seq5 Length=1492030 Score = 91.5 bits (100), Expect = 2e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 40795 ATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACC 40854 ||||| | || |||||||| || |||| || ||||| |||||||| || | |||||| Sbjct 1092307 ATCCCTCCTGATCAGCAACGCCTGATCTTTGCAGGCAAGCAGCTGGAGGATGGCCGCACC 1092248 Query 40855 CTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 || |||||||||||||||||||| |||| || ||||| || ||||| Sbjct 1092247 CTGTCGGACTACAACATCCAGAAGGAATCCACCCTTCATCTCGTCTTGCG 1092198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218562416240