Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq14 152 4e-32 seq3 138 1e-27 >seq14 Length=1069518 Score = 152 bits (168), Expect = 4e-32 Identities = 152/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || |||||||| ||||||| |||||| |||||||||||| || ||| Sbjct 1024171 GTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCA 1024112 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| ||||||||||| |||||||| || ||||||||||| || || || Sbjct 1024111 GCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTCGCCTTC 1024052 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| |||||| || |||||| |||| || | ||| ||||| |||| ||| Sbjct 1024051 ACATTGTCGATGGTGTCGCTGGACTCGACTTCGAGAGTGATCGTCTTGCCAGTCAAAGTC 1023992 Query 118722 TTTACAAAAATCTGCAT 118738 || || ||||||||||| Sbjct 1023991 TTCACGAAAATCTGCAT 1023975 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || || || || || |||||||| ||| | ||||| |||||| Sbjct 1023499 ACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCA 1023440 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || |||||| |||| || |||||||| || ||||| || ||||||||||| | Sbjct 1023439 AGCTGCTTCCCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGA 1023380 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| ||||| | ||||||||| | || | ||| ||| Sbjct 1023379 ATCTTGGCCTTGACGTTATCGATAGTGTCGCTCGACTCGACCTCAAGAGTGATCGTCTTG 1023320 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||||||| || || || |||||||| Sbjct 1023319 CCGGTCAGAGTCTTGACGAAGATCTGCAT 1023291 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| ||||| | | | ||| | ||| | || ||||| || ||||||||||| || Sbjct 1023747 TACCACCGCGGAGACGAAGCACAAGGTGAAGCGTTGACTCCTTCTGAATGTTGTAGTCCG 1023688 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||||| || || ||||| || || ||| ||||||||||||||||||| || | Sbjct 1023687 AGAGTGTGCGACCGTCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGGG 1023628 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | ||||||||||| || || || || || | |||| ||||||| ||| | Sbjct 1023627 GAATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTATCGATAGTGTCCGATGACTCAA 1023568 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 |||||| || | || ||||||||||| || || ||||| ||||||||| Sbjct 1023567 CCTCGAGTGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATG 1023518 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 |||||||| || || || ||||| ||| | ||||| ||||||||||| || || Sbjct 1023943 GTAGACTCCTTCTGGATATTGTAGTCGGAAAGGGTGCGACCGTCCTCGAGCTGCTTGCCG 1023884 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| || ||||||||||||||||| |||||||||||||| ||| || || Sbjct 1023883 GCGAAGATCAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTG 1023824 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||| |||| ||||| |||| || | || || || |||| || Sbjct 1023823 ACGTTATCAATGGTATCCGACGATTCGACTTCGAGCGTGATGGTCTTTCCCGTCAACGTC 1023764 Query 118722 TTTACAAAAATCTGCAT 118738 || || || || ||||| Sbjct 1023763 TTGACGAAGATTTGCAT 1023747 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || ||||||||||| || ||||| |||||| ||||| Sbjct 1023266 GTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGGCCATCCTCAAGCTG 1023207 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGC 118635 ||| |||||| |||| || |||||||| ||||| || |||| Sbjct 1023206 TTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGAATGC 1023166 >seq3 Length=1694370 Score = 138 bits (152), Expect = 1e-27 Identities = 157/211 (74%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||| | || ||||| || || || ||||| || | |||||| ||||| Sbjct 423004 CACCAGGTGAAGCGTCGACTCCTTCTGGATATTGTAGTCAGAAAGAGTGCGACCGTCCTC 423063 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || ||||| |||| || || ||||| |||||||| ||||| |||||||| Sbjct 423064 GAGCTGCTTGCCAGCAAAGATCAGCCGTTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTG 423123 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 |||||| || || | |||| |||||||| ||||||||||| ||| | || || Sbjct 423124 GATTTTTGCCTTGACGTTGTCGATGGTGTCCGATGACTCGACCTCGAGGGTGATGGTCTT 423183 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 ||| |||||||| || ||||| ||||||||| Sbjct 423184 GCCTGTCAGAGTCTTGACAAAGATCTGCATG 423214 Score = 114 bits (126), Expect = 1e-20 Identities = 152/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||| | || || || || || || |||||||| || || || ||||| Sbjct 423513 CACCAGGTGAAGGGTGGATTCCTTCTGGATATTGTAATCCGACAGGGTACGGCCGTCCTC 423572 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || |||||| |||| || | |||||| || ||||| |||||||||||||| Sbjct 423573 AAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTG 423632 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || ||| || | |||| ||||||| | ||||||||||| || | || || Sbjct 423633 GATCTTGGCTTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGTGTGATGGTCTT 423692 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 ||| || ||||| || || || ||||||||| Sbjct 423693 GCCAGTGAGAGTCTTGACGAAGATCTGCATG 423723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829876556508