Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08-
23] 99 sequences; 29,503,487 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq14 152 4e-32
seq3 138 1e-27
>seq14
Length=1069518
Score = 152 bits (168), Expect = 4e-32
Identities = 152/197 (77%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || |||||||| ||||||| |||||| |||||||||||| || |||
Sbjct 1024171 GTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCA 1024112
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| |||| ||||||||||| |||||||| || ||||||||||| || || ||
Sbjct 1024111 GCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTCGCCTTC 1024052
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| |||||| || |||||| |||| || | ||| ||||| |||| |||
Sbjct 1024051 ACATTGTCGATGGTGTCGCTGGACTCGACTTCGAGAGTGATCGTCTTGCCAGTCAAAGTC 1023992
Query 118722 TTTACAAAAATCTGCAT 118738
|| || |||||||||||
Sbjct 1023991 TTCACGAAAATCTGCAT 1023975
Score = 125 bits (138), Expect = 6e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||| | || || || || || |||||||| ||| | ||||| ||||||
Sbjct 1023499 ACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCA 1023440
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || |||||| |||| || |||||||| || ||||| || ||||||||||| |
Sbjct 1023439 AGCTGCTTCCCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGA 1023380
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| ||||| | ||||||||| | || | ||| |||
Sbjct 1023379 ATCTTGGCCTTGACGTTATCGATAGTGTCGCTCGACTCGACCTCAAGAGTGATCGTCTTG 1023320
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||||||||| || || || ||||||||
Sbjct 1023319 CCGGTCAGAGTCTTGACGAAGATCTGCAT 1023291
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| ||||| | | | ||| | ||| | || ||||| || ||||||||||| ||
Sbjct 1023747 TACCACCGCGGAGACGAAGCACAAGGTGAAGCGTTGACTCCTTCTGAATGTTGTAGTCCG 1023688
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| ||||| || || ||||| || || ||| ||||||||||||||||||| || |
Sbjct 1023687 AGAGTGTGCGACCGTCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGGG 1023628
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| ||||||||||| || || || || || | |||| ||||||| ||| |
Sbjct 1023627 GAATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTATCGATAGTGTCCGATGACTCAA 1023568
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|||||| || | || ||||||||||| || || ||||| |||||||||
Sbjct 1023567 CCTCGAGTGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATG 1023518
Score = 98.7 bits (108), Expect = 9e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|||||||| || || || ||||| ||| | ||||| ||||||||||| || ||
Sbjct 1023943 GTAGACTCCTTCTGGATATTGTAGTCGGAAAGGGTGCGACCGTCCTCGAGCTGCTTGCCG 1023884
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| |||| || ||||||||||||||||| |||||||||||||| ||| || ||
Sbjct 1023883 GCGAAGATCAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTG 1023824
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | ||| |||| ||||| |||| || | || || || |||| ||
Sbjct 1023823 ACGTTATCAATGGTATCCGACGATTCGACTTCGAGCGTGATGGTCTTTCCCGTCAACGTC 1023764
Query 118722 TTTACAAAAATCTGCAT 118738
|| || || || |||||
Sbjct 1023763 TTGACGAAGATTTGCAT 1023747
Score = 84.2 bits (92), Expect = 2e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || || ||||||||||| || ||||| |||||| |||||
Sbjct 1023266 GTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGGCCATCCTCAAGCTG 1023207
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGC 118635
||| |||||| |||| || |||||||| ||||| || ||||
Sbjct 1023206 TTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGAATGC 1023166
>seq3
Length=1694370
Score = 138 bits (152), Expect = 1e-27
Identities = 157/211 (74%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||| ||| | || ||||| || || || ||||| || | |||||| |||||
Sbjct 423004 CACCAGGTGAAGCGTCGACTCCTTCTGGATATTGTAGTCAGAAAGAGTGCGACCGTCCTC 423063
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||| || ||||| |||| || || ||||| |||||||| ||||| ||||||||
Sbjct 423064 GAGCTGCTTGCCAGCAAAGATCAGCCGTTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTG 423123
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|||||| || || | |||| |||||||| ||||||||||| ||| | || ||
Sbjct 423124 GATTTTTGCCTTGACGTTGTCGATGGTGTCCGATGACTCGACCTCGAGGGTGATGGTCTT 423183
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
||| |||||||| || ||||| |||||||||
Sbjct 423184 GCCTGTCAGAGTCTTGACAAAGATCTGCATG 423214
Score = 114 bits (126), Expect = 1e-20
Identities = 152/211 (72%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||| ||| | || || || || || || |||||||| || || || |||||
Sbjct 423513 CACCAGGTGAAGGGTGGATTCCTTCTGGATATTGTAATCCGACAGGGTACGGCCGTCCTC 423572
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || |||||| |||| || | |||||| || ||||| ||||||||||||||
Sbjct 423573 AAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTG 423632
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || ||| || | |||| ||||||| | ||||||||||| || | || ||
Sbjct 423633 GATCTTGGCTTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGTGTGATGGTCTT 423692
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
||| || ||||| || || || |||||||||
Sbjct 423693 GCCAGTGAGAGTCTTGACGAAGATCTGCATG 423723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433829876556508
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |