Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08-
23] 99 sequences; 29,503,487 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq3 127 1e-24
seq14 113 3e-20
>seq3
Length=1694370
Score = 127 bits (140), Expect = 1e-24
Identities = 167/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
||| || || || | ||||||||||| | || ||| ||||| || ||||| || ||
Sbjct 423495 TCCACCACGGAGACGAAGCACCAGGTGAAGGGTGGATTCCTTCTGGATATTGTAATCCGA 423554
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
||| |||| |||| || | ||||||||| ||||| || |||| ||||||||| ||
Sbjct 423555 CAGGGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGG 423614
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGA 34340
| || ||||||||| ||| || ||||| | | | | |||| || | || ||||
Sbjct 423615 GATGCCCTCCTTGTCCTGGATC-TTGGCTTTGACGTTGTCGATCGTGTCCGAGGACTCGA 423673
Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
| || | |||||||| ||||| |||||||| || || |||||||||||
Sbjct 423674 CCTCGAGTGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 423722
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| || || | ||||||||||| | || || ||||| || |||||||| ||
Sbjct 422987 CCGCCACGGAGACGGAGCACCAGGTGAAGCGTCGACTCCTTCTGGATATTGTAGTCAGAA 423046
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || |||| || | ||||||||| || || || ||||| ||||||||| ||
Sbjct 423047 AGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGCCGTTGCTGGTCGGGAGGG 423106
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || |||||||| || ||| ||| | | | | || | || | || |||||
Sbjct 423107 ATGCCTTCCTTGTCCTGGATTTTTGCCTTGACGTTGTCGATGGTGTCCGATGACTCGACC 423166
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | |||||||| ||||| || ||||| || ||||||||||||||
Sbjct 423167 TCGAGGGTGATGGTCTTGCCTGTCAGAGTCTTGACAAAGATCTGCAT 423213
>seq14
Length=1069518
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| ||||| || | ||||| ||||| | || || ||||| ||||||||||| ||
Sbjct 1023745 CCACCGCGGAGACGAAGCACAAGGTGAAGCGTTGACTCCTTCTGAATGTTGTAGTCCGAG 1023686
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || |||| |||| ||||||||| ||||| ||||| |||||||| || |||
Sbjct 1023685 AGTGTGCGACCGTCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGGA 1023626
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || |||||| || ||||| ||| | | | || | || | || || ||
Sbjct 1023625 ATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTATCGATAGTGTCCGATGACTCAACC 1023566
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | |||||||| |||||||| || || |||||||||||||||||
Sbjct 1023565 TCGAGTGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 1023519
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
||| ||||| |||||||||||||| || ||| | || || | |||||| || |||||
Sbjct 1023482 TTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCGAA 1023423
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317
|| || ||||||||||| || | | ||||||||| ||||| ||| | |
Sbjct 1023422 GATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTT 1023363
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| || | ||| |||| ||||| || | ||||| || |||||||| ||||| || ||
Sbjct 1023362 ATCGATAGTGTCGCTCGACTCGACCTCAAGAGTGATCGTCTTGCCGGTCAGAGTCTTGAC 1023303
Query 34378 AAAGATCTGCAT 34389
|||||||||||
Sbjct 1023302 GAAGATCTGCAT 1023291
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || || | |||||| || || | ||| || ||||| || |||||||||||
Sbjct 1023973 CCACCACGGAGACGCAGCACGAGATGAAGGGTAGACTCCTTCTGGATATTGTAGTCGGAA 1023914
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || |||| || | ||||||||| ||||| || || |||||||| ||| ||
Sbjct 1023913 AGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGAGGG 1023854
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | | | || | ||| | |||||||||
Sbjct 1023853 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTATCAATGGTATCCGACGATTCGACT 1023794
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||||||||| || || || | || || || ||||| |||||
Sbjct 1023793 TCGAGCGTGATGGTCTTTCCCGTCAACGTCTTGACGAAGATTTGCAT 1023747
Score = 102 bits (112), Expect = 5e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| |||||||||||| ||| ||| | || || | ||||||||| |||||
Sbjct 1024165 TCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAG 1024106
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
|| || |||||||||||| || | | ||||||||| ||||| ||| | || |
Sbjct 1024105 ATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTG 1024046
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | ||| | || ||||| || | ||||| || ||||| || | ||| |||||
Sbjct 1024045 TCGATGGTGTCGCTGGACTCGACTTCGAGAGTGATCGTCTTGCCAGTCAAAGTCTTCACG 1023986
Query 34379 AAGATCTGCAT 34389
|| ||||||||
Sbjct 1023985 AAAATCTGCAT 1023975
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323071610193440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |