Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq3 122 7e-23 seq14 120 2e-22 >seq3 Length=1694370 Score = 122 bits (134), Expect = 7e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| ||||| ||||||||| || |||||||| || |||| |||| || Sbjct 423005 ACCAGGTGAAGCGTCGACTCCTTCTGGATATTGTAGTCAGAAAGAGTGCGACCGTCCTCG 423064 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || |||| ||| || ||||||||||| | || ||||||||| Sbjct 423065 AGCTGCTTGCCAGCAAAGATCAGCCGTTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGG 423124 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 |||||| ||| || | | | ||||| ||| ||||| | ||| || |||||| Sbjct 423125 ATTTTTGCCTTGACGTTGTCGATGGTGTCCGATGACTCGACCTCGAGGGTGATGGTCTTG 423184 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || ||||||||||| |||||||| |||||| Sbjct 423185 CCTGTCAGAGTCTTGACAAAGATCTGCATG 423214 >seq14 Length=1069518 Score = 120 bits (132), Expect = 2e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 |||||||||| ||||||||| |||||||||||| |||| ||| | || || || || Sbjct 1024178 GTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTG 1024119 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| || | ||||| ||||||||||| | ||||||||||||| || || Sbjct 1024118 CTTGCCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTT 1024059 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| | ||| || || | || ||||||||||| || Sbjct 1024058 CGCCTTCACATTGTCGATGGTGTCGCTGGACTCGACTTCGAGAGTGATCGTCTTGCCAGT 1023999 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || ||||||||| || || ||||| Sbjct 1023998 CAAAGTCTTCACGAAAATCTGCAT 1023975 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| |||||||| |||||||||||| || ||| | || || Sbjct 1023499 ACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCA 1023440 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || ||||| || | ||||| ||||| ||||| | ||||||||||||| | Sbjct 1023439 AGCTGCTTCCCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGA 1023380 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | |||| | ||| ||||| | || ||||||||| Sbjct 1023379 ATCTTGGCCTTGACGTTATCGATAGTGTCGCTCGACTCGACCTCAAGAGTGATCGTCTTG 1023320 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||||||||| || ||||| ||||| Sbjct 1023319 CCGGTCAGAGTCTTGACGAAGATCTGCAT 1023291 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| || ||||||||| || |||| |||| || || || || |||||||| Sbjct 1023938 CTCCTTCTGGATATTGTAGTCGGAAAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAA 1023879 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 |||| ||||| || |||||||| | |||||||||||| ||| || ||| || Sbjct 1023878 GATCAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTT 1023819 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | | ||| || || || | || || ||||| ||||||| ||||| || Sbjct 1023818 ATCAATGGTATCCGACGATTCGACTTCGAGCGTGATGGTCTTTCCCGTCAACGTCTTGAC 1023759 Query 45325 AAAGATTTGCAT 45336 ||||||||||| Sbjct 1023758 GAAGATTTGCAT 1023747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074723317079