Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq6 158 1e-33 seq1 123 2e-23 seq3 118 9e-22 seq14 114 1e-20 >seq6 Length=1460661 Score = 158 bits (174), Expect = 1e-33 Identities = 381/585 (65%), Gaps = 49/585 (8%) Strand=Plus/Minus Query 23342 TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGC 23401 || ||||| |||| || ||||| | ||||| || |||||||| || || || |||||| Sbjct 1096813 TCGACGCGCTTCATGAACAGATCTGAAATCCAGAGGGCGTAGAAAAGGTCACGTGCGCGC 1096754 Query 23402 ACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCAC 23461 || ||||| |||||| |||||| || || | || || || ||||| || ||||| Sbjct 1096753 ACTTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGGAACTCGAAGACGTCGGCGTGCCAG 1096694 Query 23462 GGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGG 23521 ||||||| ||| | ||||| || || || | ||| || ||||| || |||||||| || Sbjct 1096693 GGCTCGATGTAGATAGCAAAGGCACCGGGGCGCTTGTTACCGCCTTGGTCGACGTAGCGA 1096634 Query 23522 GCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA---------------C 23566 || || | ||| | | ||||| || |||| |||||| || | Sbjct 1096633 GCAGTAGCATCGTAAGCACGGAGCATGGGGACGATACCGTTCGAGTAGCCATTGGTGCCC 1096574 Query 23567 GCG--------------------------CCGCCTACGCC----CGCCACA---CTCGAA 23593 ||| | || | | | ||||| | ||| | Sbjct 1096573 GCGATGTAGGAGCTGAGACATGGTCAGAGCAGCGGATGACTCATCGCCAGATTACTC-AC 1096515 Query 23594 CCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATC 23653 || || || || | ||||| | ||| | || || || || | | || || ||||| Sbjct 1096514 CCCTTGGCGCGGATATTGTGGATGTGCATTCCAATACCACCAGCGGTCTTGGAAATCATT 1096455 Query 23654 GCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAG 23713 |||||| || || || || |||||||||||||| ||||| || || | || |||| | Sbjct 1096454 GCGCATGTCTTGAGGGTATCATAGATGCCCTCGATACTGTCGTCCTTCATGGCAACCAGG 1096395 Query 23714 AAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGC 23773 ||||| ||||| | || | | |||||| |||| ||| || |||||||| ||||| Sbjct 1096394 AAACAGGAAGAGAGCTGAGGATGGGGCGTGCCGGCATTGAAGAGCGTCGGGCTAGCGTGT 1096335 Query 23774 GTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCG 23833 || ||||| | | ||||| || |||| || | | ||| ||||| || ||| Sbjct 1096334 GTGAAGTACCGCTCGGACATCAGGGTGTAGGTTGCTAATGCGCGGTCAATATCTCGGCCG 1096275 Query 23834 TGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG 23878 |||||||| ||||| || ||||||| ||| | || |||| |||| Sbjct 1096274 TGTATACCAATGGCTACACGCATCAGCATCTGCTGGGGTCGCTCG 1096230 Score = 102 bits (112), Expect = 7e-17 Identities = 324/494 (66%), Gaps = 15/494 (3%) Strand=Plus/Minus Query 22457 ACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCG 22516 || || || |||||||||| | || || || ||| || | ||||| |||| ||| Sbjct 1097744 ACAACCTGGAACTCGCCGGCGAGTACACGACGCGCGTAGATCATAGATGTATACGGCTCG 1097685 Query 22517 AAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGT 22576 || | || ||||| ||||| ||||| | || || ||||| ||||| || || | || Sbjct 1097684 AAGCACTCGTTGTTCCCCAGGATCTGGGAAGTGGAGGCGGTAGGCATAGGGGCAAGGAGG 1097625 Query 22577 AGCGAGTTTCTCA-AGCCGTGCTT-TGAAATTTTACTCTTGAGCATCGACCAGTCCCACA 22634 || ||||| | || | |||||| ||| || | || | ||| | ||||||||| Sbjct 1097624 AGGGAGTTGCGCAGACCCGTGCGGCTGATCTTCTCCT--TCAGCCCGGCCCAGTCCCAGC 1097567 Query 22635 GATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGC 22694 | ||||| ||| |||| | |||| | || | || | | | || || || ||| Sbjct 1097566 GGTCGGAAGGCATCAC---GCCCCATAGGTCAAACTGGAGCTCTCCACGGGAAGCAGGGG 1097510 Query 22695 TGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACG 22754 ||||||| |||| ||||||| || | || |||| | ||| |||||| | || Sbjct 1097509 AGCCTTCGAACGTCTCGTACGCGCCGTCCGTCTCGGCCATCTCGTTCGACGCCTCGAGCG 1097450 Query 22755 CGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATT--CG-GCGGC-GGCGACGCTT 22810 | ||| || |||||||||||||| | ||| | | || || | ||||| Sbjct 1097449 CAGCGTGGTAGATAGTCTCGAAGATATCGCGGTTAAGCTGACGAGCTTCGGGCGA----G 1097394 Query 22811 TCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATC 22870 ||| ||||||| || | || |||||||| || | |||||| || || | ||||| Sbjct 1097393 TCGAACGGCATGCGAAGAGCCATAAACGCGTCGGCGAGACCCTGCACACCAACGCCGATA 1097334 Query 22871 GGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATT 22930 || |||| || ||| ||| ||||| |||| ||||| | || |||||| Sbjct 1097333 GGACGGTGACGCATATTAGACCGACGAGCCTCAGGCACGGGATAGTAGTTGACATCGATG 1097274 Query 22931 GTTCTGTTCAAGTT 22944 ||| ||||| ||| Sbjct 1097273 ATTCGGTTCAGGTT 1097260 >seq1 Length=2114445 Score = 123 bits (136), Expect = 2e-23 Identities = 285/426 (67%), Gaps = 20/426 (5%) Strand=Plus/Plus Query 57979 TCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGA 58038 |||| |||||||| || || || || ||||| || ||| ||| || || || || |||| Sbjct 847499 TCGCCTTCGCCGCTGTGGAGGGCATCTTCTTCTCCGGCTCCTTCGCTGCCATCTTCTGGA 847558 Query 58039 TGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACG 58098 ||||||| ||||| || |||||||| ||||| || ||||||| | || || ||||| | Sbjct 847559 TGAAGAAGCGCGGTCTCATGCCCGGTCTGACATTCTCCAACGAGCTCATCTCCCGCGATG 847618 Query 58099 AGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACAT-------TGTCAATAAA 58151 |||| | || || || ||||| |||||| | | | ||| | | | | | Sbjct 847619 AGGGCATGCACACCGACTTTGCATGCCTACTCTTCAGCCACCTCCGCCGGCGCCCACATC 847678 Query 58152 CCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTT 58211 ||||| | | |||| | || || || |||||||| ||||||| | || Sbjct 847679 CCGACAC-CGTCCGCA------AAATCATTACTGAGGCGGTACTGATCGAACAAACTTTC 847731 Query 58212 GTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTAC 58271 |||| || ||||| || || || | |||| |||||| | | ||| ||||| Sbjct 847732 CTCACGGATGCCCTTCCTGTCGCGCTCATCGGCATGAACTCGAACCTAATGAACCAGTAC 847791 Query 58272 ATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTC-ATTACAAC 58328 || ||||| || ||||| | ||| | ||| || | |||| ||| || || | Sbjct 847792 ATAGAGTTCGTCGCCGATCGCCTTCTTGTCGCTCTCGGCAACGAGAAGGTCTATAACGTC 847851 Query 58329 ACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTC 58388 ||| || || || || || ||| | || ||||| || |||| ||||||||||| ||| Sbjct 847852 ACG---AACCCCTTCGACTTCATGGACCTCATCTCCCTTCAGGGAAAGACAAACTTCTTC 847908 Query 58389 GAAAAA 58394 || ||| Sbjct 847909 GAGAAA 847914 >seq3 Length=1694370 Score = 118 bits (130), Expect = 9e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || ||||||||||||||||| || |||||| |||| || || | || Sbjct 423214 CATGCAGATCTTTGTCAAGACTCTGACAGGCAAGACCATCACCCTCGAGGTCGAGTCATC 423155 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| | ||| ||||||||||||| | || |||||||| Sbjct 423154 GGACACCATCGACAACGTCAAGGCAAAAATCCAGGACAAGGAAGGCATCCCTCCCGACCA 423095 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| || || || || |||||||| ||| | || ||| | ||| | || || || Sbjct 423094 GCAACGGCTGATCTTTGCTGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCTGACTACAA 423035 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || ||||| ||||| ||||| || Sbjct 423034 TATCCAGAAGGAGTCGACGCTTCACCTGGTGCT 423002 Score = 107 bits (118), Expect = 2e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| |||||||| || ||||| || ||||| |||| || || | || Sbjct 423723 CATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACACTCGAGGTCGAGTCCTC 423664 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | |||||| | || ||||||||| ||| | || || ||||| Sbjct 423663 GGACACGATCGACAACGTCAAAGCCAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCA 423604 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || ||||||||||| ||| | || ||| || || ||||| || Sbjct 423603 GCAGAGGCTGATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGTACCCTGTCGGATTACAA 423544 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 || || || ||||| || ||||| ||||| ||| Sbjct 423543 TATCCAGAAGGAATCCACCCTTCACCTGGTGCTT 423510 >seq14 Length=1069518 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||| |||| ||||| |||||||| |||| || || | | Sbjct 1023975 ATGCAGATTTTCGTGAAGACTTTGACTGGCAAGACGATCACTCTCGAAGTCGAGTCCAGC 1024034 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || || || ||||||||| || | || ||||||||| Sbjct 1024035 GACACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAG 1024094 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||||||||| ||| | || || ||| ||||||| || ||| Sbjct 1024095 CAGCGTCTTATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTACAAC 1024154 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 || || || || || || || || || || ||| Sbjct 1024155 ATCCAGAAGGAGTCCACGCTGCACCTTGTCCTT 1024187 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || ||||| ||||| ||||| || ||||| |||| ||||| | || Sbjct 1023518 CATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACACTCGAGGTTGAGTCATC 1023577 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| | ||||| | || ||| ||||| ||| | || || || || Sbjct 1023578 GGACACTATCGATAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCTGATCA 1023637 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| ||||| ||| |||||||| | || | || || || Sbjct 1023638 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAAGACGGTCGCACACTCTCGGACTACAA 1023697 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||| || || || || ||||| || || ||| | || | || |||| Sbjct 1023698 CATTCAGAAGGAGTCAACGCTTCACCTTGTGCTTCGTCTCCGCGGTGGTA 1023747 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||||||||| ||||| |||||||| | || || || || | Sbjct 1023291 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACGATCACTCTTGAGGTCGAGTCGAGC 1023350 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| | ||||| | || ||||||||| || | || || |||||| Sbjct 1023351 GACACTATCGATAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCAG 1023410 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || |||||||| || ||| | || || || | ||| || ||| Sbjct 1023411 CAGCGCCTTATCTTCGCTGGGAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAAC 1023470 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 || || || ||||| || ||||| |||| ||| Sbjct 1023471 ATCCAGAAGGAATCCACCCTTCACTTGGTTCTT 1023503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765848364080