Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1 156 6e-33 seq6 86.0 9e-12 >seq1 Length=2114445 Score = 156 bits (172), Expect = 6e-33 Identities = 296/431 (69%), Gaps = 15/431 (3%) Strand=Plus/Plus Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 || || || |||||||| || |||||||||||||| || || || || |||||||| Sbjct 847495 CTCGTCGCCTTCGCCGCTGTGGAGGGCATCTTCTTCTCCGGCTCCTTCGCTGCCATCTTC 847554 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 ||| | ||||||||||| ||||||||||| ||||| | |||||| | || || || Sbjct 847555 TGGATGAAGAAGCGCGGTCTCATGCCCGGTCTGACATTCTCCAACGAGCTCATCTCCCGC 847614 Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAG 125606 || |||||| | ||| |||||||| ||||| || || | | || || || | | Sbjct 847615 GATGAGGGCATGCACACCGACTTTGCATGCCTACTCTT---CAGCCACCTCCG-CCGGCG 847670 Query 125607 TGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAA 125666 || |||| || | ||| ||| || | || || || || ||| |||||| Sbjct 847671 CCCACATCC-----CGACACCGTCCGCAAAATCATTACTGAGGCGGTACTGATCGAACAA 847725 Query 125667 GAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGC 125726 || || || || |||| || ||| | || |||||||||| || |||||| | Sbjct 847726 ACTTTCCTCACGGATGCCCTTCCTGTCGCGCTCATCGGCATGAACTCGAACCTAATGAAC 847785 Query 125727 GAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATT 125783 ||||||||||||| || || ||||| || || || | ||| || ||| | Sbjct 847786 CAGTACATAGAGTTCGTCGCCGATCGCCTTCTTGTCG---CTCTCGGCAACGAGAAGGTC 847842 Query 125784 TACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAAC 125843 || |||| || ||| ||||| || |||||| | ||| || || |||| ||||| ||| Sbjct 847843 TATAACGTCACGAACCCCTTCGACTTCATGGACCTCATCTCCCTTCAGGGAAAGACAAAC 847902 Query 125844 TTTTTCGAGAA 125854 || |||||||| Sbjct 847903 TTCTTCGAGAA 847913 Score = 91.5 bits (100), Expect = 2e-13 Identities = 168/241 (70%), Gaps = 4/241 (2%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| |||| ||||| ||||| | || ||| | || ||| Sbjct 847037 ATCTGGCAGATGTACAAGAAGGCAGAGGCATCCTTCTGGACAGCAGAGGAGATGGACCTG 847096 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| || | || ||| | | ||| ||| | | ||||| | || || || Sbjct 847097 TCCAAGGATCTCCATGACTGGCAAAACCGTCTGAACAATAACGAGCGTCATTTCATCTCC 847156 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||| | | || ||||| || | ||||| || ||||||||||| ||||| ||||| || Sbjct 847157 CACGTCCTTGCTTTCTTCGCTGCTTCCGACGGCATCGTCAACGAGAATCTCGTTGA-GCG 847215 Query 125198 ATTCTCTCAA-GAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256 || | ||| ||| || | | |||| ||||| ||||| |||||||| |||| Sbjct 847216 GTT-TAGCAATGAGGTGCAGGCTGCTGAGGCCCGATGCTTCTACGGTTTCCAAATAATGA 847274 Query 125257 T 125257 | Sbjct 847275 T 847275 >seq6 Length=1460661 Score = 86.0 bits (94), Expect = 9e-12 Identities = 128/181 (71%), Gaps = 3/181 (2%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 || ||||| || || || || || || | || ||||| | || || |||||||| ||| Sbjct 1096647 CAAGGCGGTAACAAGCGCCCCGGTGCCTTTGCTATCTACATCGAGCCCTGGCACGCCGAC 1096706 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || |||| ||||||| ||| ||| || || | || || | ||| Sbjct 1096707 GTCTTCGAGTTCCTCGACCTGCGCAAGAACCACGGCAAGGAGGAAGTGCGCGCACGTGAC 1096766 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA---CGACGGTGGC 97052 | || || || |||||| | ||||| ||||||||||||||||| | |||||||| | Sbjct 1096767 CTTTTCTACGCCCTCTGGATTTCAGATCTGTTCATGAAGCGCGTCGAGTCCGACGGTGAC 1096826 Query 97053 T 97053 | Sbjct 1096827 T 1096827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058282939240