Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08-
23] 99 sequences; 29,503,487 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq1 156 6e-33
seq6 86.0 9e-12
>seq1
Length=2114445
Score = 156 bits (172), Expect = 6e-33
Identities = 296/431 (69%), Gaps = 15/431 (3%)
Strand=Plus/Plus
Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486
|| || || |||||||| || |||||||||||||| || || || || ||||||||
Sbjct 847495 CTCGTCGCCTTCGCCGCTGTGGAGGGCATCTTCTTCTCCGGCTCCTTCGCTGCCATCTTC 847554
Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546
||| | ||||||||||| ||||||||||| ||||| | |||||| | || || ||
Sbjct 847555 TGGATGAAGAAGCGCGGTCTCATGCCCGGTCTGACATTCTCCAACGAGCTCATCTCCCGC 847614
Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAG 125606
|| |||||| | ||| |||||||| ||||| || || | | || || || | |
Sbjct 847615 GATGAGGGCATGCACACCGACTTTGCATGCCTACTCTT---CAGCCACCTCCG-CCGGCG 847670
Query 125607 TGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAA 125666
|| |||| || | ||| ||| || | || || || || ||| ||||||
Sbjct 847671 CCCACATCC-----CGACACCGTCCGCAAAATCATTACTGAGGCGGTACTGATCGAACAA 847725
Query 125667 GAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGC 125726
|| || || || |||| || ||| | || |||||||||| || |||||| |
Sbjct 847726 ACTTTCCTCACGGATGCCCTTCCTGTCGCGCTCATCGGCATGAACTCGAACCTAATGAAC 847785
Query 125727 GAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATT 125783
||||||||||||| || || ||||| || || || | ||| || ||| |
Sbjct 847786 CAGTACATAGAGTTCGTCGCCGATCGCCTTCTTGTCG---CTCTCGGCAACGAGAAGGTC 847842
Query 125784 TACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAAC 125843
|| |||| || ||| ||||| || |||||| | ||| || || |||| ||||| |||
Sbjct 847843 TATAACGTCACGAACCCCTTCGACTTCATGGACCTCATCTCCCTTCAGGGAAAGACAAAC 847902
Query 125844 TTTTTCGAGAA 125854
|| ||||||||
Sbjct 847903 TTCTTCGAGAA 847913
Score = 91.5 bits (100), Expect = 2e-13
Identities = 168/241 (70%), Gaps = 4/241 (2%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| |||| ||||| ||||| | || ||| | || |||
Sbjct 847037 ATCTGGCAGATGTACAAGAAGGCAGAGGCATCCTTCTGGACAGCAGAGGAGATGGACCTG 847096
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|||||||| || | || ||| | | ||| ||| | | ||||| | || || ||
Sbjct 847097 TCCAAGGATCTCCATGACTGGCAAAACCGTCTGAACAATAACGAGCGTCATTTCATCTCC 847156
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197
||| | | || ||||| || | ||||| || ||||||||||| ||||| ||||| ||
Sbjct 847157 CACGTCCTTGCTTTCTTCGCTGCTTCCGACGGCATCGTCAACGAGAATCTCGTTGA-GCG 847215
Query 125198 ATTCTCTCAA-GAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256
|| | ||| ||| || | | |||| ||||| ||||| |||||||| ||||
Sbjct 847216 GTT-TAGCAATGAGGTGCAGGCTGCTGAGGCCCGATGCTTCTACGGTTTCCAAATAATGA 847274
Query 125257 T 125257
|
Sbjct 847275 T 847275
>seq6
Length=1460661
Score = 86.0 bits (94), Expect = 9e-12
Identities = 128/181 (71%), Gaps = 3/181 (2%)
Strand=Plus/Plus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
|| ||||| || || || || || || | || ||||| | || || |||||||| |||
Sbjct 1096647 CAAGGCGGTAACAAGCGCCCCGGTGCCTTTGCTATCTACATCGAGCCCTGGCACGCCGAC 1096706
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| || || || |||| ||||||| ||| ||| || || | || || | |||
Sbjct 1096707 GTCTTCGAGTTCCTCGACCTGCGCAAGAACCACGGCAAGGAGGAAGTGCGCGCACGTGAC 1096766
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA---CGACGGTGGC 97052
| || || || |||||| | ||||| ||||||||||||||||| | |||||||| |
Sbjct 1096767 CTTTTCTACGCCCTCTGGATTTCAGATCTGTTCATGAAGCGCGTCGAGTCCGACGGTGAC 1096826
Query 97053 T 97053
|
Sbjct 1096827 T 1096827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058282939240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |